Detailed information
Bioinformatically predicted
Overview
| Name | hns | Type | Regulator |
| Locus tag | IEC338SC_RS03665 | Genome accession | NZ_CP015145 |
| Coordinates | 761966..762292 (+) | Length | 108 a.a. |
| NCBI ID | WP_000801427.1 | Uniprot ID | N9J3X5 |
| Organism | Acinetobacter pittii strain IEC338SC | ||
| Function | repress the expression of competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 756966..767292
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IEC338SC_RS03640 (IEC338SC_0733) | hemC | 757581..758498 (+) | 918 | WP_032037675.1 | hydroxymethylbilane synthase | - |
| IEC338SC_RS03645 (IEC338SC_0734) | hemD | 758502..759269 (+) | 768 | WP_063097984.1 | uroporphyrinogen-III synthase | - |
| IEC338SC_RS03650 (IEC338SC_0735) | - | 759278..760120 (+) | 843 | WP_063097985.1 | hypothetical protein | - |
| IEC338SC_RS03655 (IEC338SC_0736) | - | 760130..761323 (+) | 1194 | WP_017385883.1 | membrane protein | - |
| IEC338SC_RS03660 (IEC338SC_0737) | - | 761331..761771 (+) | 441 | WP_063097986.1 | acyl-CoA thioesterase | - |
| IEC338SC_RS03665 (IEC338SC_0738) | hns | 761966..762292 (+) | 327 | WP_000801427.1 | H-NS family nucleoid-associated regulatory protein | Regulator |
| IEC338SC_RS03670 (IEC338SC_0739) | gspN | 762627..763370 (+) | 744 | WP_002121195.1 | type II secretion system protein N | - |
| IEC338SC_RS03675 (IEC338SC_0740) | - | 763370..764206 (+) | 837 | WP_063097987.1 | type II secretion system protein N | - |
| IEC338SC_RS03680 (IEC338SC_0741) | gspD | 764248..766518 (+) | 2271 | WP_063097988.1 | type II secretion system secretin GspD | - |
| IEC338SC_RS03685 (IEC338SC_0742) | - | 766559..767185 (+) | 627 | WP_063097989.1 | FHA domain-containing protein | - |
Sequence
Protein
Download Length: 108 a.a. Molecular weight: 12462.12 Da Isoelectric Point: 5.0524
>NTDB_id=177095 IEC338SC_RS03665 WP_000801427.1 761966..762292(+) (hns) [Acinetobacter pittii strain IEC338SC]
MKPDISELSVEELKRLQEEAEALIASKKDQAIEDAYNQIIEIAENVGFSVEQLLEFGAQKRKKTTRKSVEPRYRNKNNAE
ETWTGRGKQPRWLVAEIEKGAKLEDFLI
MKPDISELSVEELKRLQEEAEALIASKKDQAIEDAYNQIIEIAENVGFSVEQLLEFGAQKRKKTTRKSVEPRYRNKNNAE
ETWTGRGKQPRWLVAEIEKGAKLEDFLI
Nucleotide
Download Length: 327 bp
>NTDB_id=177095 IEC338SC_RS03665 WP_000801427.1 761966..762292(+) (hns) [Acinetobacter pittii strain IEC338SC]
ATGAAACCGGATATCAGTGAATTATCTGTTGAAGAGTTAAAACGCTTACAAGAAGAAGCAGAAGCTTTAATTGCAAGTAA
AAAAGATCAAGCAATCGAAGATGCTTATAATCAAATTATCGAGATTGCTGAAAATGTAGGTTTCAGTGTTGAACAACTTC
TTGAGTTTGGTGCTCAAAAACGTAAGAAAACAACTCGTAAATCTGTTGAGCCTCGTTACCGCAACAAAAACAATGCTGAA
GAGACTTGGACTGGTCGCGGTAAACAACCACGCTGGTTAGTTGCTGAAATTGAAAAAGGTGCAAAACTTGAAGATTTCTT
AATCTAA
ATGAAACCGGATATCAGTGAATTATCTGTTGAAGAGTTAAAACGCTTACAAGAAGAAGCAGAAGCTTTAATTGCAAGTAA
AAAAGATCAAGCAATCGAAGATGCTTATAATCAAATTATCGAGATTGCTGAAAATGTAGGTTTCAGTGTTGAACAACTTC
TTGAGTTTGGTGCTCAAAAACGTAAGAAAACAACTCGTAAATCTGTTGAGCCTCGTTACCGCAACAAAAACAATGCTGAA
GAGACTTGGACTGGTCGCGGTAAACAACCACGCTGGTTAGTTGCTGAAATTGAAAAAGGTGCAAAACTTGAAGATTTCTT
AATCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| hns | Acinetobacter baumannii strain A118 |
100 |
100 |
1 |