Detailed information NTG0177004

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: BE957_RS27585
• Genome accession: NZ_CP018948
• Coordinates: 4862089..4863114 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain Ecol_224
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4857089..4868114

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BE957_RS27575 (BE957_28045)	rpmE	4859320..4859532 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
BE957_RS27580 (BE957_28050)	priA	4859735..4861933 (+)	2199	WP_001348093.1	primosomal protein N'	Machinery gene
BE957_RS27585 (BE957_28055)	cytR	4862089..4863114 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
BE957_RS27590 (BE957_28060)	ftsN	4863206..4864165 (+)	960	WP_000068834.1	cell division protein FtsN	-
BE957_RS27595 (BE957_28065)	hslV	4864258..4864788 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
BE957_RS27600 (BE957_28070)	hslU	4864798..4866129 (+)	1332	WP_001293343.1	HslU--HslV peptidase ATPase subunit	-
BE957_RS27605 (BE957_28075)	menA	4866196..4867122 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
BE957_RS27610 (BE957_28080)	rraA	4867215..4867700 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
BE957_RS27615 (BE957_28085)	zapB	4867785..4868030 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=177004 BE957_RS27585 WP_000644904.1 4862089..4863114(+) (cytR) [Escherichia coli strain Ecol_224]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=177004 BE957_RS27585 WP_000644904.1 4862089..4863114(+) (cytR) [Escherichia coli strain Ecol_224]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTCGCACCGGAACTGGAG
CTACCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATCTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGTTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628