Detailed information NTG0176876

Bioinformatically predicted

Overview

• Name: xerS
• Type: Machinery gene
• Locus tag: BVD85_RS04150
• Genome accession: NZ_CP018908
• Coordinates: 830807..831877 (+)
• Length: 356 a.a.
• NCBI ID: WP_012775101.1
• Uniprot ID: A0A0H3MV97
• Organism: Streptococcus suis strain SS2-1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 825807..836877

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BVD85_RS04130 (BVD85_04105)	-	826920..827588 (+)	669	WP_011922395.1	SatD family protein	-
BVD85_RS04135 (BVD85_04110)	-	827592..828332 (+)	741	WP_011922396.1	DUF3307 domain-containing protein	-
BVD85_RS04140 (BVD85_04115)	-	828397..828834 (+)	438	WP_011922397.1	AAA family ATPase	-
BVD85_RS10555 (BVD85_04130)	-	829545..830446 (+)	902	Protein_759	Abi family protein	-
BVD85_RS04150 (BVD85_04135)	xerS	830807..831877 (+)	1071	WP_012775101.1	tyrosine recombinase XerS	Machinery gene
BVD85_RS04155 (BVD85_04140)	-	831947..833455 (-)	1509	WP_011922400.1	phosphomannomutase/phosphoglucomutase	-
BVD85_RS04160 (BVD85_04145)	-	833531..834472 (-)	942	WP_012775102.1	sensor histidine kinase	-
BVD85_RS04165 (BVD85_04150)	braR	834469..835134 (-)	666	WP_012775103.1	response regulator transcription factor	Regulator
BVD85_RS04170 (BVD85_04155)	-	835173..835430 (-)	258	WP_011922404.1	type II toxin-antitoxin system RelE family toxin	-
BVD85_RS04175 (BVD85_04160)	relB	835414..835665 (-)	252	WP_012775104.1	type II toxin-antitoxin system RelB family antitoxin	-

Sequence

Protein

• Length: 356 a.a.
• Molecular weight: 41485.66 Da
• Isoelectric Point: 9.2257

>NTDB_id=176876 BVD85_RS04150 WP_012775101.1 830807..831877(+) (xerS) [Streptococcus suis strain SS2-1]
MRRELLLEKIDQLKEIMPWFVLEYYQSKLAVPYSFTTLYEYLKEYRRFFEWLQDSDLVAVERIADIPLDVLEHLTKKDME
AFILYLRERPLLNANTTQNGVSQTTINRTLSALSSLFKYLTEEVENEQGEPYFYRNVMKKVSTKKKKETLAARAENIKQK
LFLGDETMEFLDYVDKEYQVNLSKRALSSFQKNKERDLAILALLLASGVRLSEAVNLDLRDVNLNMMIIEVTRKGGKRDS
VNVAGFAKPYLEAYMGIRQQRYKAEKTDTAFFLSEYRGLPNRIDASSIEKMVAKYSADFKIRVTPHKLRHTLATRLYDAT
KSQVLVSHQLGHANTQVTDLYTHIVNDEQKNALDQL

Nucleotide

• Length: 1071 bp

>NTDB_id=176876 BVD85_RS04150 WP_012775101.1 830807..831877(+) (xerS) [Streptococcus suis strain SS2-1]
ATGAGACGCGAGTTATTATTGGAAAAAATTGATCAACTAAAAGAAATTATGCCTTGGTTTGTTCTGGAATATTATCAGTC
AAAATTGGCTGTGCCTTACAGTTTTACTACCTTATATGAATACTTGAAAGAATACCGTCGTTTTTTTGAATGGTTACAGG
ATTCGGATTTGGTGGCTGTTGAACGGATTGCTGACATTCCGCTGGATGTTCTGGAACATCTGACAAAAAAAGATATGGAA
GCTTTCATTCTTTATCTGCGGGAGCGTCCCTTGCTGAACGCCAATACCACGCAGAATGGTGTGTCGCAGACCACCATTAA
CCGTACCCTCTCGGCCCTTTCTAGTCTCTTCAAGTATTTAACCGAAGAAGTGGAGAATGAGCAGGGCGAGCCCTACTTCT
ACCGCAATGTCATGAAAAAGGTATCTACTAAGAAGAAGAAGGAAACCTTGGCAGCGCGGGCGGAGAACATCAAGCAAAAG
CTCTTTTTGGGCGATGAAACGATGGAGTTCTTGGACTATGTGGACAAGGAATACCAAGTCAATCTCTCTAAACGTGCCCT
CTCCTCCTTCCAGAAAAATAAGGAGCGGGATTTGGCGATTCTGGCGCTTCTCTTGGCTTCTGGCGTCCGTCTGTCAGAAG
CGGTGAATTTGGATCTTCGAGATGTAAACCTCAATATGATGATTATCGAAGTAACTCGTAAGGGTGGTAAACGGGACTCG
GTCAATGTGGCTGGGTTTGCTAAGCCCTACTTAGAAGCCTACATGGGCATCCGTCAGCAACGCTACAAGGCTGAAAAAAC
GGATACAGCCTTCTTCCTGTCCGAATACCGTGGTCTGCCTAACCGTATCGATGCTTCTTCTATTGAAAAAATGGTTGCCA
AGTACTCTGCGGACTTCAAGATACGCGTAACCCCCCACAAACTCCGTCACACATTGGCAACTCGTCTCTACGACGCCACC
AAGTCGCAAGTTCTAGTCAGTCATCAGCTGGGCCATGCCAATACCCAGGTCACCGATCTCTACACCCATATCGTCAACGA
TGAACAGAAAAATGCTCTGGATCAGTTGTGA

Domains

Predicted by InterProScan.

• Phage integrase family (Phage_integrase) (190-344)

• Phage integrase, N-terminal SAM-like domain (Phage_int_SAM_4) (33-122)

3D structure

• AlphaFold DB: A0A0H3MV97

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xerS	Streptococcus pneumoniae R6	83.146	100	0.831