Detailed information NTG0176755

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: BUN12_RS18850
• Genome accession: NZ_CP018902
• Coordinates: 3612475..3613650 (+)
• Length: 391 a.a.
• NCBI ID: WP_065118507.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain HK1
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3607475..3618650

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BUN12_RS18820 (BUN12_3658)	-	3607698..3608204 (+)	507	WP_065118502.1	hypothetical protein	-
BUN12_RS18825 (BUN12_3659)	-	3608266..3608646 (+)	381	WP_065118514.1	cystatin-like fold lipoprotein	-
BUN12_RS18830 (BUN12_3660)	-	3608735..3609460 (+)	726	WP_065118503.1	hypothetical protein	-
BUN12_RS18835 (BUN12_3662)	-	3609907..3610170 (-)	264	WP_065118504.1	hypothetical protein	-
BUN12_RS18840 (BUN12_3663)	-	3610182..3610931 (-)	750	WP_065118505.1	PmeII family type II restriction endonuclease	-
BUN12_RS18845 (BUN12_3664)	-	3610983..3612113 (-)	1131	WP_065118506.1	DNA cytosine methyltransferase	-
BUN12_RS18850 (BUN12_3665)	rapC	3612475..3613650 (+)	1176	WP_065118507.1	Rap family tetratricopeptide repeat protein	Regulator
BUN12_RS18855 (BUN12_3667)	-	3613933..3614391 (-)	459	WP_065118508.1	SMI1/KNR4 family protein	-
BUN12_RS18860 (BUN12_3668)	-	3614404..3616200 (-)	1797	WP_065118509.1	T7SS effector LXG polymorphic toxin	-
BUN12_RS18870 (BUN12_3669)	-	3616941..3617378 (+)	438	WP_013351105.1	hypothetical protein	-
BUN12_RS18875 (BUN12_3670)	-	3617499..3618002 (-)	504	WP_013351106.1	RrF2 family transcriptional regulator	-

Sequence

Protein

• Length: 391 a.a.
• Molecular weight: 46366.73 Da
• Isoelectric Point: 4.6626

>NTDB_id=176755 BUN12_RS18850 WP_065118507.1 3612475..3613650(+) (rapC) [Bacillus amyloliquefaciens strain HK1]
MQQGFLKRSKIPYDLVTKKLNAWYMAIKSDLVEEAERIKVEAEAELANMEENQDALLYYQLLEFRHEIMLSYMKSKNMDS
LENAYETLREIESQGQLTGMLEYYFYFFMGMYEFRRKELTTAISAYRIAEKKLFEVEDEIERAEFFFKVAHVYYYMKQTY
FSLNYANRALKIFKQYDAYAVQTIRCQNIIAGNLIDSLDYERALDVFRDTLRIAESVGADYLIGMSRMNIGICYDYIGEY
DKAAEYLQTSLEFFEKTEHVFLTKTLFNIVNVKTKQEALAEALLYLKKGQSVAKKYGDSEYEAKFKIIEGLYFSDDEYSL
IEEAFSYLNEKRMFGDIENFAIRVADYFYEEGDLSRSNEYYRLSIEARRKIKKGEIINEDQPDFVYSHFIG

Nucleotide

• Length: 1176 bp

>NTDB_id=176755 BUN12_RS18850 WP_065118507.1 3612475..3613650(+) (rapC) [Bacillus amyloliquefaciens strain HK1]
TTGCAGCAGGGTTTTTTAAAGAGAAGCAAAATTCCATATGATTTGGTGACAAAAAAACTAAATGCTTGGTACATGGCGAT
AAAGAGTGATTTGGTTGAGGAAGCAGAACGAATTAAAGTGGAAGCTGAAGCTGAACTAGCTAATATGGAAGAAAATCAAG
ATGCTCTATTATATTATCAGCTGCTAGAATTCAGACATGAAATCATGTTGAGCTATATGAAGTCAAAGAATATGGATAGC
TTGGAAAATGCATATGAGACGCTAAGGGAAATTGAATCCCAAGGTCAATTAACCGGTATGTTGGAGTATTATTTTTATTT
CTTTATGGGAATGTATGAATTTAGAAGGAAAGAACTGACTACAGCAATAAGTGCTTATCGAATCGCGGAGAAAAAGTTGT
TTGAGGTGGAAGATGAAATTGAAAGGGCGGAGTTCTTCTTCAAAGTCGCCCATGTGTATTACTATATGAAACAAACTTAT
TTTTCTTTAAATTATGCCAATCGGGCGCTTAAAATTTTCAAACAGTACGATGCGTATGCAGTTCAAACCATAAGATGTCA
AAATATAATTGCTGGTAATTTAATTGACTCTTTGGATTATGAAAGAGCACTAGATGTGTTTAGAGACACATTGCGTATAG
CTGAATCAGTTGGAGCGGATTACTTGATTGGTATGTCTCGAATGAATATTGGTATTTGTTATGATTATATAGGTGAATAT
GATAAAGCAGCTGAGTATTTACAAACGTCATTAGAATTTTTCGAAAAGACTGAACACGTCTTTTTGACAAAAACATTGTT
CAATATTGTAAATGTTAAAACGAAACAGGAAGCTCTGGCTGAAGCCTTACTTTATTTAAAAAAGGGGCAATCTGTCGCAA
AGAAATACGGAGATTCAGAATATGAAGCAAAGTTTAAGATTATAGAAGGACTTTATTTTAGTGATGATGAATATTCTTTA
ATTGAAGAGGCCTTTTCGTATCTGAATGAAAAAAGAATGTTCGGAGACATTGAAAATTTTGCAATTAGAGTAGCGGATTA
TTTTTATGAAGAAGGGGATTTATCACGTTCCAATGAGTATTATCGACTGAGTATTGAAGCGAGACGAAAAATAAAAAAAG
GGGAGATTATTAATGAAGATCAGCCGGACTTTGTTTACAGTCATTTTATTGGGTAG

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (10-70)

• Tetratricopeptide repeat (TPR_12) (199-256)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	38.4	95.908	0.368