Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   BSL84_RS24860 Genome accession   NZ_CP018870
Coordinates   5445309..5446103 (-) Length   264 a.a.
NCBI ID   WP_030027001.1    Uniprot ID   A0ABQ3NFS1
Organism   Streptomyces sp. TN58     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 5440309..5451103
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BSL84_RS24845 (BSL84_24845) - 5440490..5441200 (+) 711 WP_030027005.1 GNAT family N-acetyltransferase -
  BSL84_RS24850 (BSL84_24850) - 5441299..5443191 (+) 1893 WP_075971142.1 IucA/IucC family protein -
  BSL84_RS24855 (BSL84_24855) - 5443246..5445216 (+) 1971 WP_030027003.1 ATP-dependent DNA helicase -
  BSL84_RS24860 (BSL84_24860) dinR/lexA 5445309..5446103 (-) 795 WP_030027001.1 transcriptional repressor LexA Regulator
  BSL84_RS24865 (BSL84_24865) nrdR 5446577..5447086 (+) 510 WP_030027000.1 transcriptional regulator NrdR -
  BSL84_RS24870 (BSL84_24870) - 5447232..5450123 (+) 2892 WP_045322138.1 vitamin B12-dependent ribonucleotide reductase -
  BSL84_RS24875 (BSL84_24875) - 5450318..5450923 (+) 606 WP_030026998.1 YdbC family protein -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 28532.31 Da        Isoelectric Point: 7.4239

>NTDB_id=176555 BSL84_RS24860 WP_030027001.1 5445309..5446103(-) (dinR/lexA) [Streptomyces sp. TN58]
MTTTADSAAITAQNRSQSRLEPVHAMNDANLNPDAEAAVRPARSLPGRPPGIRADSSGLTDRQRRVIEVIRDSVQRRGYP
PSMREIGQAVGLSSTSSVAHQLMALERKGFLRRDPHRPRAYEVRGSDQPSSQPTDTTGKPAASYVPLVGRIAAGGPILAE
ESVEDVFPLPRQLVGDGELFVLKVVGDSMIEAAICDGDWVTVRRQPVAENGDIVAAMLDGEATVKRFKREDGHVWLLPHN
AAYQPIPGDEATILGKVVAVLRRV

Nucleotide


Download         Length: 795 bp        

>NTDB_id=176555 BSL84_RS24860 WP_030027001.1 5445309..5446103(-) (dinR/lexA) [Streptomyces sp. TN58]
GTGACCACCACCGCAGACAGTGCCGCCATCACTGCCCAGAACCGCTCCCAGAGCCGACTTGAGCCGGTGCATGCCATGAA
CGACGCAAACCTGAACCCGGACGCGGAGGCCGCAGTGCGCCCCGCCCGCTCGCTGCCAGGTCGACCTCCAGGCATCCGCG
CCGACAGCTCCGGGCTCACGGACCGGCAGCGGAGGGTCATCGAGGTCATCCGCGACTCCGTGCAGCGCCGGGGTTACCCG
CCGTCGATGCGGGAGATCGGCCAGGCCGTCGGCCTGTCCAGCACGTCGTCGGTGGCGCACCAGCTGATGGCCCTGGAGCG
CAAGGGCTTCCTGCGCCGCGACCCGCACCGCCCCAGGGCCTACGAGGTGCGCGGCTCGGACCAGCCCAGCTCGCAGCCCA
CGGACACCACCGGCAAGCCCGCCGCCTCCTACGTTCCGCTGGTCGGCCGGATCGCGGCCGGCGGGCCGATCCTCGCCGAG
GAGTCGGTCGAGGACGTGTTCCCACTCCCCCGCCAGCTCGTCGGCGACGGTGAGCTCTTCGTCCTCAAGGTCGTCGGCGA
CTCGATGATCGAGGCCGCCATCTGCGACGGCGACTGGGTCACCGTCCGCCGCCAGCCGGTCGCCGAGAACGGCGACATCG
TCGCCGCGATGCTGGACGGCGAAGCGACCGTCAAGCGCTTCAAGCGCGAGGACGGCCATGTCTGGCTCCTCCCGCACAAC
GCCGCCTACCAGCCGATCCCCGGCGACGAGGCGACCATCCTCGGCAAGGTCGTCGCCGTCCTGCGCCGCGTCTGA

Domains

Predicted by InterProScan.

Peptidase S24-like (Peptidase_S24)

(146-258)

LexA DNA binding domain (LexA_DNA_bind)

(57-120)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

46.698

80.303

0.375