Detailed information NTG0176537

Bioinformatically predicted

Overview

• Name: pilQ
• Type: Machinery gene
• Locus tag: A2G07_RS17890
• Genome accession: NZ_CP015081
• Coordinates: 1934694..1935962 (-)
• Length: 422 a.a.
• NCBI ID: WP_227086002.1
• Uniprot ID: -
• Organism: Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 strain R1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1929694..1940962

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A2G07_RS09600 (A2G07_09610)	-	1929965..1930942 (-)	978	WP_027479984.1	alpha/beta hydrolase	-
A2G07_RS09605 (A2G07_09615)	aroQ	1930939..1931370 (-)	432	WP_010887424.1	type II 3-dehydroquinate dehydratase	-
A2G07_RS09610 (A2G07_09620)	aroB	1931519..1932571 (-)	1053	WP_010887423.1	3-dehydroquinate synthase	-
A2G07_RS09615 (A2G07_09625)	-	1932558..1933274 (-)	717	WP_010887422.1	shikimate kinase	-
A2G07_RS09620 (A2G07_09630)	aroC	1933282..1934430 (-)	1149	WP_010887421.1	chorismate synthase	-
A2G07_RS17890	pilQ	1934694..1935962 (-)	1269	WP_227086002.1	type II secretion system protein GspD	Machinery gene
A2G07_RS09630 (A2G07_09640)	-	1936920..1938827 (-)	1908	WP_010887419.1	hypothetical protein	-
A2G07_RS09635 (A2G07_09645)	-	1938824..1939483 (-)	660	WP_010887418.1	type 4a pilus biogenesis protein PilO	-
A2G07_RS09640 (A2G07_09650)	-	1939480..1940196 (-)	717	WP_010887417.1	hypothetical protein	-

Sequence

Protein

• Length: 422 a.a.
• Molecular weight: 44190.66 Da
• Isoelectric Point: 5.4747

>NTDB_id=176537 A2G07_RS17890 WP_227086002.1 1934694..1935962(-) (pilQ) [Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 strain R1]
MQRIYTVRGQAADITALLAAQYPTLRVTPVGQTGQLVLNGAQAQLDTALALLEQVDRPAPVAESRTVQRVFQLVNASAEE
VKATLEGTLARDLTADSNNDVLPNVPVTATDANGNTTVVSVPNALGKTANQGTANAQAQTAQTPANTQQATLIADKRTNS
LIVRGTPEQVAQVAELVPQLDQVVPQINVQVRIQEVNERALQSLGLNWRATFGGFNVAVSGGTGLAATFNPTQSFLGFNI
FPTLTALETQGLTRRVYDGNVTMQSGQRSLSATGGAQNASSGAAASVKSGGRLEINIPSAAGNIVRQIDYGLNLDFFSPQ
VAPDGTITLRIRGQVNQPATAITADSLPNLIDFTNSEAQSTITFKNGQTILMSGLLGSTETTNRSGVPFLSSLPGVGAAF
GEKRTEKTQSQLLVIITGTVVK

Nucleotide

• Length: 1269 bp

>NTDB_id=176537 A2G07_RS17890 WP_227086002.1 1934694..1935962(-) (pilQ) [Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 strain R1]
GTGCAGCGCATCTACACCGTGCGCGGCCAGGCCGCCGACATCACGGCGCTGCTCGCTGCCCAGTACCCTACCCTGCGCGT
GACCCCGGTGGGGCAGACCGGCCAACTGGTGCTCAACGGCGCTCAGGCCCAGCTCGACACGGCGCTCGCCCTGCTCGAAC
AGGTGGACCGCCCCGCCCCGGTGGCCGAGTCCCGTACCGTTCAGCGCGTCTTCCAGCTCGTCAACGCCAGCGCTGAGGAA
GTCAAGGCGACCCTGGAAGGCACCCTGGCGCGTGACCTGACCGCCGACAGCAATAACGACGTGCTGCCCAACGTGCCCGT
CACCGCCACCGACGCCAACGGCAACACGACCGTGGTGAGCGTGCCCAACGCGCTCGGCAAGACGGCGAACCAGGGCACGG
CGAATGCTCAGGCTCAGACTGCCCAGACTCCGGCCAACACCCAGCAGGCGACCCTGATCGCCGACAAGCGCACCAACAGC
CTGATCGTGCGCGGCACGCCCGAACAGGTGGCGCAGGTGGCCGAGCTGGTGCCGCAGCTCGATCAGGTGGTGCCGCAGAT
CAACGTGCAGGTGCGGATTCAGGAGGTCAACGAGCGAGCGCTGCAATCGCTGGGCCTCAACTGGCGGGCGACCTTCGGTG
GCTTCAACGTGGCGGTCTCGGGCGGCACCGGGCTGGCGGCCACCTTCAACCCCACCCAGAGCTTCCTCGGTTTCAACATT
TTCCCGACCCTCACGGCGCTCGAAACCCAGGGCCTGACCCGGCGCGTGTACGACGGCAACGTGACCATGCAAAGCGGCCA
GCGCTCGCTGAGTGCCACGGGCGGCGCCCAGAACGCTTCGAGCGGCGCGGCGGCCAGCGTCAAGAGTGGGGGCCGACTGG
AAATCAACATCCCCTCGGCGGCGGGCAACATCGTGCGGCAGATCGATTACGGTCTCAACCTCGATTTCTTCAGCCCGCAG
GTGGCGCCCGACGGCACCATCACCCTGCGTATTCGCGGTCAGGTCAACCAGCCGGCAACGGCGATCACCGCCGACAGCCT
GCCCAACCTCATCGACTTCACCAACAGCGAAGCGCAAAGCACCATCACCTTCAAGAACGGCCAGACCATCCTGATGAGCG
GCCTGCTCGGCAGCACCGAGACCACCAACCGCAGCGGCGTGCCCTTCCTGAGCAGCCTGCCCGGTGTGGGCGCGGCCTTC
GGGGAAAAACGCACCGAGAAGACCCAGTCGCAACTGCTCGTCATCATCACCGGCACCGTCGTCAAATAA

Domains

Predicted by InterproScan.

• Bacterial type II and III secretion system protein (Secretin) (279-422)

• Bacterial type II/III secretion system short domain (Secretin_N) (69-185)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilQ	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	100	100	1