Detailed information    

insolico Bioinformatically predicted

Overview

Name   recO   Type   Machinery gene
Locus tag   BTR42_RS00265 Genome accession   NZ_CP018822
Coordinates   33918..34673 (+) Length   251 a.a.
NCBI ID   WP_009853183.1    Uniprot ID   A0A1I7JAI7
Organism   Streptococcus gallolyticus subsp. gallolyticus DSM 16831     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 28918..39673
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BTR42_RS00245 (BTR42_00090) mreD 29449..29955 (+) 507 WP_077495895.1 rod shape-determining protein MreD -
  BTR42_RS00250 (BTR42_00095) - 30057..31439 (+) 1383 WP_009853181.1 CHAP domain-containing protein -
  BTR42_RS00255 (BTR42_00100) - 31582..32550 (+) 969 WP_003062784.1 ribose-phosphate diphosphokinase -
  BTR42_RS00260 (BTR42_00105) - 32753..33928 (+) 1176 WP_009853182.1 pyridoxal phosphate-dependent aminotransferase -
  BTR42_RS00265 (BTR42_00110) recO 33918..34673 (+) 756 WP_009853183.1 DNA repair protein RecO Machinery gene
  BTR42_RS00270 (BTR42_00115) plsX 34845..35840 (+) 996 WP_012961315.1 phosphate acyltransferase PlsX -
  BTR42_RS00275 (BTR42_00120) - 35857..36099 (+) 243 WP_009853185.1 acyl carrier protein -
  BTR42_RS00280 (BTR42_00125) purC 36224..36934 (+) 711 WP_009853186.1 phosphoribosylaminoimidazolesuccinocarboxamide synthase -

Sequence

Protein


Download         Length: 251 a.a.        Molecular weight: 29160.50 Da        Isoelectric Point: 6.4977

>NTDB_id=176145 BTR42_RS00265 WP_009853183.1 33918..34673(+) (recO) [Streptococcus gallolyticus subsp. gallolyticus DSM 16831]
MQTKETYGLVLYNRNYREDDKLVKIFTETNGKHMFFVKHAGKSRFNSVIQPLTVAKFILKINDTGLSFIEDYKEVDSFKE
INADLFKLSYASYVTALADAAVPDGVADPQLFAFVNKTLSLMEEGLDYEILTNIFEIQLLERFGVSLNFHECAFCHRVGL
PFDFSHKYSGLLCPEHYGKDDYRSHLDPNVLYLVDRFQAIHFDELKTISVKPEMKRKLRLFIDDIYDNYVGLRLKSKKFI
DDLGTWGNIMK

Nucleotide


Download         Length: 756 bp        

>NTDB_id=176145 BTR42_RS00265 WP_009853183.1 33918..34673(+) (recO) [Streptococcus gallolyticus subsp. gallolyticus DSM 16831]
ATGCAAACTAAGGAAACTTATGGTCTTGTCCTCTATAATCGTAATTATCGTGAGGATGATAAGCTAGTCAAAATTTTTAC
AGAAACCAATGGAAAGCATATGTTTTTTGTTAAACATGCTGGTAAATCTCGGTTTAATTCTGTTATTCAGCCGTTAACGG
TGGCAAAATTTATTTTAAAAATTAATGATACAGGTCTGTCTTTCATTGAAGATTATAAGGAAGTTGACTCTTTTAAGGAA
ATTAATGCAGATTTGTTTAAGTTGTCCTATGCTTCTTATGTGACAGCATTGGCGGATGCAGCTGTGCCAGATGGTGTGGC
AGACCCGCAGTTGTTTGCATTTGTTAATAAGACGCTTTCCTTAATGGAAGAGGGACTTGACTACGAAATTTTGACTAATA
TTTTTGAGATTCAACTTTTAGAACGATTTGGTGTTAGTCTTAATTTTCATGAGTGTGCTTTTTGTCATCGGGTTGGATTG
CCCTTTGACTTTTCGCACAAATATTCTGGTCTGCTTTGTCCAGAGCATTATGGAAAAGATGATTATCGTAGTCATCTTGA
TCCGAATGTGCTGTACCTGGTGGACCGATTTCAAGCCATTCATTTTGATGAATTAAAGACGATTTCAGTTAAGCCTGAGA
TGAAACGAAAATTGCGTTTATTTATTGATGATATTTATGATAATTATGTCGGTCTTCGTTTGAAAAGTAAAAAATTCATT
GATGATTTAGGGACTTGGGGAAATATTATGAAATAA

Domains

Predicted by InterProScan.

Recombination protein O C terminal (RecO_C)

(84-237)

Recombination protein O N terminal (RecO_N)

(1-78)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1I7JAI7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recO Streptococcus pneumoniae R6

63.347

100

0.633