Detailed information NTG0176119

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: A4F89_RS10910
• Genome accession: NZ_CP015016
• Coordinates: 2173166..2174056 (+)
• Length: 296 a.a.
• NCBI ID: WP_071539811.1
• Uniprot ID: -
• Organism: Polynucleobacter asymbioticus strain MWH-RechtKolB
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2168166..2179056

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A4F89_RS10880 (A4F89_10815)	pth	2168374..2168964 (+)	591	WP_011903757.1	aminoacyl-tRNA hydrolase	-
A4F89_RS10885 (A4F89_10820)	-	2168970..2169236 (-)	267	WP_071539808.1	YfhL family 4Fe-4S dicluster ferredoxin	-
A4F89_RS10890 (A4F89_10825)	coaD	2169254..2169751 (-)	498	WP_071539809.1	pantetheine-phosphate adenylyltransferase	-
A4F89_RS10895 (A4F89_10830)	rsmD	2169788..2170378 (-)	591	WP_011903760.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
A4F89_RS10900 (A4F89_10835)	-	2170398..2171735 (-)	1338	WP_071539810.1	pitrilysin family protein	-
A4F89_RS10905 (A4F89_10840)	-	2171735..2173102 (-)	1368	WP_011903762.1	pitrilysin family protein	-
A4F89_RS10910 (A4F89_10845)	pilA	2173166..2174056 (+)	891	WP_071539811.1	signal recognition particle-docking protein FtsY	Machinery gene
A4F89_RS10915 (A4F89_10850)	rpoH	2174179..2175078 (+)	900	WP_048812307.1	RNA polymerase sigma factor RpoH	-
A4F89_RS10920 (A4F89_10855)	-	2175100..2175690 (-)	591	WP_071539812.1	SCO family protein	-
A4F89_RS10925 (A4F89_10860)	cyoE	2175692..2176585 (-)	894	WP_071539813.1	heme o synthase	-
A4F89_RS10930 (A4F89_10865)	-	2176582..2177712 (-)	1131	WP_071539814.1	COX15/CtaA family protein	-
A4F89_RS10935 (A4F89_10870)	-	2177712..2178368 (-)	657	WP_011903768.1	hypothetical protein	-

Sequence

Protein

• Length: 296 a.a.
• Molecular weight: 31530.14 Da
• Isoelectric Point: 6.9753

>NTDB_id=176119 A4F89_RS10910 WP_071539811.1 2173166..2174056(+) (pilA) [Polynucleobacter asymbioticus strain MWH-RechtKolB]
MFGLRKTLGSLFKTSKTDEAWFDTLEESLIQSDVGLPTTEQLIIKLRKAAKSDKASSPEELQALLIQEVSTLLGSLEPNP
NPLFTDQKIHIPEVWLVVGVNGAGKTTTIGKLCKLFQSQGKSVLLAAGDTFRAAARNQLQEWGGRNQVDVITQDGGDAAA
VAHDAIHAANSRKSDILIIDTAGRLATQDHLMEELKKVKRVIGKALPGAPHHTLLVLDGNTGQNGLSQVKAFHAALGLTG
LIVTKLDGTAKGGVICALAHTLKDEPKPAVLALGKGEGIDDLVPFTAHQYSSELFN

Nucleotide

• Length: 891 bp

>NTDB_id=176119 A4F89_RS10910 WP_071539811.1 2173166..2174056(+) (pilA) [Polynucleobacter asymbioticus strain MWH-RechtKolB]
ATGTTCGGCCTACGTAAAACCCTCGGATCCCTATTCAAAACCAGCAAGACGGATGAAGCTTGGTTTGATACTTTAGAAGA
GTCACTCATTCAAAGTGATGTGGGTCTCCCCACAACTGAACAATTGATTATCAAATTACGTAAAGCTGCAAAATCTGATA
AAGCATCCAGCCCAGAAGAGCTCCAGGCACTCCTCATACAAGAAGTGAGTACCTTACTAGGTTCACTAGAACCAAATCCA
AACCCATTATTTACAGATCAGAAGATCCATATTCCCGAGGTTTGGTTGGTAGTAGGGGTGAATGGTGCAGGCAAAACCAC
CACTATTGGCAAGTTATGCAAGCTCTTTCAATCTCAAGGTAAATCGGTATTACTGGCAGCTGGCGACACTTTTAGGGCGG
CCGCTAGAAATCAACTTCAAGAATGGGGTGGCAGAAATCAAGTGGATGTCATCACTCAAGATGGTGGTGACGCAGCTGCC
GTAGCCCATGATGCAATTCATGCGGCCAACTCTCGCAAGAGTGACATCTTAATTATTGATACAGCGGGACGACTGGCTAC
CCAAGATCACCTCATGGAAGAGCTCAAAAAAGTGAAGCGGGTGATTGGCAAGGCGCTTCCTGGCGCCCCTCACCACACCC
TACTGGTACTAGATGGCAACACAGGACAGAATGGTTTAAGCCAGGTAAAGGCCTTTCATGCAGCCCTGGGACTTACAGGG
CTCATTGTTACTAAGTTAGATGGCACCGCCAAAGGGGGTGTCATTTGCGCCCTTGCTCACACTCTGAAAGATGAACCCAA
ACCGGCTGTTTTAGCCCTAGGCAAAGGTGAAGGAATTGATGATTTAGTGCCTTTCACAGCCCACCAGTATTCATCTGAAT
TATTCAATTAA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (92-295)

• SRP54-type protein, helical bundle domain (SRP54_N) (4-68)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	53.584	98.986	0.53