Detailed information    

insolico Bioinformatically predicted

Overview


Name   recX   Type   Regulator
Locus tag   A3772_RS04650 Genome accession   NZ_CP015004
Coordinates   905262..906056 (+) Length   264 a.a.
NCBI ID   WP_003243354.1    Uniprot ID   A0AAE2SGN5
Organism   Bacillus subtilis strain SZMC 6179J isolate B23     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context


Location: 900262..911056
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A3772_RS04620 (A3772_04620) sxzA 901101..902132 (+) 1032 WP_003243057.1 FecCD family ABC transporter permease -
  A3772_RS04625 (A3772_04625) yfhB 902247..903128 (+) 882 WP_003242763.1 PhzF family phenazine biosynthesis protein -
  A3772_RS04630 (A3772_04630) yfhC 903216..903800 (+) 585 WP_003243940.1 nitroreductase family protein -
  A3772_RS04635 (A3772_04635) yfhD 903839..904030 (-) 192 WP_003233561.1 YfhD family protein -
  A3772_RS04640 (A3772_04640) yfhE 904097..904207 (-) 111 WP_003223230.1 YfhE family protein -
  A3772_RS04645 (A3772_04645) yfhF 904262..905173 (-) 912 WP_003244332.1 TIGR01777 family oxidoreductase -
  A3772_RS04650 (A3772_04650) recX 905262..906056 (+) 795 WP_003243354.1 recombination regulator RecX Regulator
  A3772_RS04655 (A3772_04655) yfhH 906058..906372 (+) 315 WP_003244592.1 YfhH family protein -
  A3772_RS04665 (A3772_04665) yfhI 906515..907708 (+) 1194 WP_003243500.1 MFS transporter -
  A3772_RS04670 (A3772_04670) sspK 907741..907893 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  A3772_RS04675 (A3772_04675) yfhJ 908018..908287 (+) 270 WP_003243789.1 YfhJ family protein -
  A3772_RS04680 (A3772_04680) yfhK 908432..908950 (+) 519 WP_003243363.1 SH3 domain-containing protein -
  A3772_RS04685 (A3772_04685) spdL 909035..909367 (+) 333 WP_003242803.1 SdpC immunity protein SpdL -
  A3772_RS04690 (A3772_04690) ephM 909354..910214 (+) 861 WP_003243419.1 epoxide hydrolase EphM -

Sequence


Protein


Download         Length: 264 a.a.        Molecular weight: 31013.23 Da        Isoelectric Point: 6.6686

>NTDB_id=176025 A3772_RS04650 WP_003243354.1 905262..906056(+) (recX) [Bacillus subtilis strain SZMC 6179J isolate B23]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=176025 A3772_RS04650 WP_003243354.1 905262..906056(+) (recX) [Bacillus subtilis strain SZMC 6179J isolate B23]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGATCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAACTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains


Predicted by InterproScan.

(84-204)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

100

100

1


Multiple sequence alignment