Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | A3772_RS00245 | Genome accession | NZ_CP015004 |
| Coordinates | 44856..45146 (-) | Length | 96 a.a. |
| NCBI ID | WP_003226760.1 | Uniprot ID | A0A7G9PCZ4 |
| Organism | Bacillus subtilis strain SZMC 6179J isolate B23 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 39856..50146
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A3772_RS00205 (A3772_00205) | darA | 39879..40208 (+) | 330 | WP_003242755.1 | cyclic di-AMP receptor DarA | - |
| A3772_RS00210 (A3772_00210) | yaaR | 40221..40661 (+) | 441 | WP_009966249.1 | YaaR family protein | - |
| A3772_RS00215 (A3772_00215) | holB | 40673..41662 (+) | 990 | WP_003244417.1 | DNA polymerase III subunit delta' | - |
| A3772_RS00220 (A3772_00220) | ricT | 41665..42492 (+) | 828 | WP_003243571.1 | competence/sporulation regulator complex protein RicT | - |
| A3772_RS00225 (A3772_00225) | yabA | 42507..42866 (+) | 360 | WP_003218308.1 | replication initiation-control protein YabA | - |
| A3772_RS00230 (A3772_00230) | trmNF | 42925..43668 (+) | 744 | WP_003244526.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| A3772_RS00235 (A3772_00235) | yazA | 43655..43954 (+) | 300 | WP_003242983.1 | GIY-YIG nuclease family protein | - |
| A3772_RS00240 (A3772_00240) | rsmI | 43929..44807 (+) | 879 | WP_003243457.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| A3772_RS00245 (A3772_00245) | abrB | 44856..45146 (-) | 291 | WP_003226760.1 | transition state genes transcriptional regulator AbrB | Regulator |
| A3772_RS00250 (A3772_00250) | metG | 45641..47635 (+) | 1995 | WP_003226758.1 | methionine--tRNA ligase | - |
| A3772_RS00255 (A3772_00255) | dayD | 47714..48481 (+) | 768 | WP_003226756.1 | TatD family hydrolase | - |
| A3772_RS00260 (A3772_00260) | yabE | 48637..49950 (+) | 1314 | WP_003226754.1 | ubiquitin-like domain-containing protein | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10772.62 Da Isoelectric Point: 6.3482
>NTDB_id=176010 A3772_RS00245 WP_003226760.1 44856..45146(-) (abrB) [Bacillus subtilis strain SZMC 6179J isolate B23]
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
Nucleotide
Download Length: 291 bp
>NTDB_id=176010 A3772_RS00245 WP_003226760.1 44856..45146(-) (abrB) [Bacillus subtilis strain SZMC 6179J isolate B23]
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |