Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   A2I97_RS07015 Genome accession   NZ_CP014990
Coordinates   1338592..1339188 (+) Length   198 a.a.
NCBI ID   WP_070081746.1    Uniprot ID   -
Organism   Bacillus velezensis strain KD1     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1333592..1344188
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A2I97_RS06985 (A2I97_06765) - 1333808..1334263 (+) 456 WP_070081743.1 flavodoxin -
  A2I97_RS06990 (A2I97_06770) dapD 1334345..1335055 (+) 711 WP_007409623.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  A2I97_RS06995 (A2I97_06775) - 1335126..1336250 (+) 1125 WP_070081744.1 N-acetyldiaminopimelate deacetylase -
  A2I97_RS07000 (A2I97_06780) - 1336311..1336556 (+) 246 WP_003154596.1 YkuS family protein -
  A2I97_RS07005 (A2I97_06785) - 1336590..1337396 (-) 807 WP_060386912.1 mechanosensitive ion channel family protein -
  A2I97_RS07010 (A2I97_06790) - 1337683..1338141 (+) 459 WP_070081745.1 redoxin domain-containing protein -
  A2I97_RS07015 (A2I97_06795) rok 1338592..1339188 (+) 597 WP_070081746.1 transcriptional regulator Rok Regulator
  A2I97_RS07020 (A2I97_06800) - 1339209..1340201 (-) 993 WP_069473386.1 sporulation protein -
  A2I97_RS07025 (A2I97_06805) - 1340347..1340949 (+) 603 WP_070081747.1 molybdenum cofactor guanylyltransferase -
  A2I97_RS07030 (A2I97_06810) - 1341001..1342020 (+) 1020 WP_007611113.1 molybdopterin-synthase adenylyltransferase MoeB -
  A2I97_RS07035 (A2I97_06815) glp 1342038..1343330 (+) 1293 WP_070081748.1 gephyrin-like molybdotransferase Glp -
  A2I97_RS07040 (A2I97_06820) mobB 1343291..1343812 (+) 522 WP_046559554.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22583.61 Da        Isoelectric Point: 9.6909

>NTDB_id=175766 A2I97_RS07015 WP_070081746.1 1338592..1339188(+) (rok) [Bacillus velezensis strain KD1]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDNTGSLSDTKKEFRPEKKNDSLPVLAELAAQEMRSYQKPQ
TQPQSSQQQMQSITSLPAGIPDGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFM
QSLIKMYPEVKKPYRGQYILEGEISQETAETANDTAAE

Nucleotide


Download         Length: 597 bp        

>NTDB_id=175766 A2I97_RS07015 WP_070081746.1 1338592..1339188(+) (rok) [Bacillus velezensis strain KD1]
ATGTTTAATGAAAGAGAAGCGCTGCGCTTACGTTTAGAACAATTGAACGAAGCAGAGGTAAAAGTCATTCGTGAATATCA
AATAGAACGTGATAAAATATATGCAAAACTGAGAGAATTAGACAATACGGGCAGCCTGTCCGATACAAAAAAAGAGTTTC
GTCCGGAGAAAAAAAATGACTCCCTCCCGGTACTTGCAGAGCTTGCAGCACAGGAAATGAGAAGCTATCAAAAGCCGCAG
ACACAGCCTCAATCCTCCCAGCAGCAGATGCAGTCTATTACGTCTCTTCCCGCAGGCATTCCAGACGGTTCTACAAGAAG
AAGAAGAGGGACGGCGAGACCGGGATCGAAAGCGGCAAAACTGCGCGAAGCAGCGATTAAAACATTGAAACGCCACAATG
CAGCGATCAAAAGTTCCGAACTGCAAAAGGAAATTGAAAAGGAAAGCGGCCTTGAAATTCCTAATATGACAACATTTATG
CAAAGCTTAATTAAAATGTATCCGGAAGTGAAAAAACCATACCGCGGCCAATATATTCTTGAGGGAGAAATTTCTCAGGA
AACAGCAGAAACGGCAAATGATACGGCTGCTGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

87.629

97.98

0.859

Multiple sequence alignment