Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   A3K91_RS11740 Genome accession   NZ_CP014945
Coordinates   2839090..2839467 (-) Length   125 a.a.
NCBI ID   WP_021813722.1    Uniprot ID   A0A2A2B3S9
Organism   Psychrobacter alimentarius strain PAMC 27889     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2834090..2844467
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A3K91_RS11720 (A3K91_2338) - 2835288..2836241 (-) 954 WP_228139865.1 CheR family methyltransferase -
  A3K91_RS11725 (A3K91_2339) - 2836355..2837425 (-) 1071 Protein_2317 methyl-accepting chemotaxis protein -
  A3K91_RS11730 (A3K91_2340) - 2837942..2838472 (-) 531 WP_062845429.1 chemotaxis protein CheW -
  A3K91_RS11735 (A3K91_2341) - 2838476..2838838 (-) 363 WP_062845430.1 response regulator -
  A3K91_RS11740 (A3K91_2342) pilG 2839090..2839467 (-) 378 WP_021813722.1 twitching motility response regulator PilG Regulator
  A3K91_RS11750 (A3K91_2343) - 2840169..2841419 (+) 1251 WP_062846007.1 HlyD family efflux transporter periplasmic adaptor subunit -
  A3K91_RS11755 (A3K91_2344) - 2841718..2842440 (+) 723 WP_062845432.1 response regulator transcription factor -

Sequence

Protein


Download         Length: 125 a.a.        Molecular weight: 14054.13 Da        Isoelectric Point: 4.5807

>NTDB_id=175271 A3K91_RS11740 WP_021813722.1 2839090..2839467(-) (pilG) [Psychrobacter alimentarius strain PAMC 27889]
MENNFDGLKVMVIDDSKTIRRTAETLLQKAGCEVVTAIDGFDALAKIVDNNPDIIFVDIMMPRLDGYQTCALIKNNPDYA
NKPVIMLSSKDGLFDKARGRIVGSDEYLTKPFSKDELFEAINQYR

Nucleotide


Download         Length: 378 bp        

>NTDB_id=175271 A3K91_RS11740 WP_021813722.1 2839090..2839467(-) (pilG) [Psychrobacter alimentarius strain PAMC 27889]
ATGGAAAATAATTTTGATGGCTTAAAAGTAATGGTGATTGATGATTCAAAAACCATTCGCCGTACCGCAGAAACCTTGTT
ACAAAAAGCAGGTTGTGAAGTAGTGACCGCAATTGATGGTTTTGATGCTTTAGCGAAAATCGTTGATAACAATCCAGATA
TTATTTTTGTCGACATCATGATGCCGCGTTTAGATGGCTATCAAACATGTGCATTAATAAAGAACAATCCAGATTATGCC
AACAAACCAGTCATTATGTTGTCGTCTAAAGATGGTTTGTTTGACAAAGCAAGAGGCCGTATTGTTGGATCTGATGAGTA
TTTGACCAAGCCATTTAGTAAAGATGAGTTGTTTGAGGCAATTAACCAGTACCGCTAG

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2A2B3S9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

78.226

99.2

0.776
  pilH Synechocystis sp. PCC 6803

41.228

91.2

0.376
  vicR Streptococcus mutans UA159

40.517

92.8

0.376

Multiple sequence alignment