Detailed information
Bioinformatically predicted
Overview
| Name | pepF | Type | Regulator |
| Locus tag | AYR63_RS11295 | Genome accession | NZ_CP014924 |
| Coordinates | 2596125..2597945 (+) | Length | 606 a.a. |
| NCBI ID | WP_156773225.1 | Uniprot ID | - |
| Organism | Secundilactobacillus paracollinoides strain TMW 1.1995 | ||
| Function | degradation of XIP; competence shut-off (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2591125..2602945
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AYR63_RS11270 (AYR63_11320) | - | 2591845..2592345 (-) | 501 | WP_054712375.1 | hypothetical protein | - |
| AYR63_RS11275 (AYR63_11325) | - | 2592456..2593199 (+) | 744 | WP_065937636.1 | MBL fold metallo-hydrolase | - |
| AYR63_RS11280 (AYR63_11330) | spx | 2593324..2593728 (+) | 405 | WP_056987194.1 | transcriptional regulator Spx | - |
| AYR63_RS11285 (AYR63_11335) | - | 2593889..2594614 (+) | 726 | WP_056987193.1 | adaptor protein MecA | - |
| AYR63_RS11290 (AYR63_11340) | - | 2594984..2596051 (+) | 1068 | WP_065902918.1 | competence protein CoiA | - |
| AYR63_RS11295 (AYR63_11345) | pepF | 2596125..2597945 (+) | 1821 | WP_156773225.1 | oligoendopeptidase F | Regulator |
| AYR63_RS11300 (AYR63_11350) | - | 2598563..2599201 (-) | 639 | WP_156319346.1 | DsbA family protein | - |
| AYR63_RS11305 (AYR63_11355) | - | 2599486..2600169 (+) | 684 | WP_065903912.1 | GTP pyrophosphokinase family protein | - |
| AYR63_RS11310 (AYR63_11360) | - | 2600166..2600969 (+) | 804 | WP_056987191.1 | NAD kinase | - |
| AYR63_RS11315 (AYR63_11365) | - | 2600962..2601861 (+) | 900 | WP_054711344.1 | RluA family pseudouridine synthase | - |
Sequence
Protein
Download Length: 606 a.a. Molecular weight: 68748.42 Da Isoelectric Point: 4.6056
>NTDB_id=175155 AYR63_RS11295 WP_156773225.1 2596125..2597945(+) (pepF) [Secundilactobacillus paracollinoides strain TMW 1.1995]
MADVKQLPTRDEVDPKFTWDLTPIYATTADFEGDFNKVQEAIPELEDLRGSLATGADQLLHAIQSILSVIRRAEKVYVYA
SLKHDENTGNAENQALSGRTQTLFTSLESAIAWFEPELLAIDKATLDNMLAQNSTLGEYKHYLDTITDQRDHVLAPNEEK
LLAQAGDALGTASNTFGVLNDADLEFPVVEDNDGQAVQLSQGVYDQLIQSTKPAVREMAFKQLYAVYHQFRHTLASTLAG
NVKTHNFNAQVRYYADAREAALSGNHIPVSVYDTLVKAVNAHLPLLHRYVALRKRILGLSDLHMYDLYTPITGEPQLTYT
YETARDEALKALDVMGPDYLSHVKTAFDSRWIDVVENQGKRSGGYSSGMYDTAPYILLNWQDNLESLYTLVHEMGHSMHS
YYSSHNQPYQYGDYSIFVAEIASTTNETLLTDYLLKTYDEPQVQAFVLNHYLDGFKGTVFRQTQFAEFEQFIHEEDAAGH
PLTADHLSDYYLKLNQRYYGDAVQSDPEIADEWARIPHFYYNYYVYQYATGFAAANTLADRILSGDTSKRDAYLNYLKSG
SSDYPIEVMKKAGVDMSQETYLDQAFDQFEARLNQFEKLVEREGKR
MADVKQLPTRDEVDPKFTWDLTPIYATTADFEGDFNKVQEAIPELEDLRGSLATGADQLLHAIQSILSVIRRAEKVYVYA
SLKHDENTGNAENQALSGRTQTLFTSLESAIAWFEPELLAIDKATLDNMLAQNSTLGEYKHYLDTITDQRDHVLAPNEEK
LLAQAGDALGTASNTFGVLNDADLEFPVVEDNDGQAVQLSQGVYDQLIQSTKPAVREMAFKQLYAVYHQFRHTLASTLAG
NVKTHNFNAQVRYYADAREAALSGNHIPVSVYDTLVKAVNAHLPLLHRYVALRKRILGLSDLHMYDLYTPITGEPQLTYT
YETARDEALKALDVMGPDYLSHVKTAFDSRWIDVVENQGKRSGGYSSGMYDTAPYILLNWQDNLESLYTLVHEMGHSMHS
YYSSHNQPYQYGDYSIFVAEIASTTNETLLTDYLLKTYDEPQVQAFVLNHYLDGFKGTVFRQTQFAEFEQFIHEEDAAGH
PLTADHLSDYYLKLNQRYYGDAVQSDPEIADEWARIPHFYYNYYVYQYATGFAAANTLADRILSGDTSKRDAYLNYLKSG
SSDYPIEVMKKAGVDMSQETYLDQAFDQFEARLNQFEKLVEREGKR
Nucleotide
Download Length: 1821 bp
>NTDB_id=175155 AYR63_RS11295 WP_156773225.1 2596125..2597945(+) (pepF) [Secundilactobacillus paracollinoides strain TMW 1.1995]
TTGGCAGACGTCAAACAATTACCAACTCGTGATGAAGTAGATCCCAAATTCACGTGGGATCTCACACCAATTTATGCAAC
AACAGCCGACTTTGAAGGTGACTTCAACAAGGTCCAGGAGGCGATTCCTGAATTAGAAGACCTTCGTGGCTCTCTAGCGA
CTGGTGCTGATCAGCTGCTGCATGCGATCCAAAGCATTCTTAGCGTGATTCGACGAGCGGAAAAAGTCTATGTTTACGCG
TCTTTAAAGCACGATGAAAACACCGGAAATGCTGAGAATCAAGCGCTAAGCGGCCGAACGCAAACCTTATTTACCAGTCT
TGAAAGTGCCATTGCGTGGTTTGAACCAGAACTGCTGGCCATTGATAAGGCAACACTTGACAACATGCTGGCCCAAAACA
GTACCCTCGGTGAATACAAACACTATCTCGATACGATTACGGATCAGCGAGATCACGTTTTGGCCCCCAACGAAGAAAAA
TTATTGGCCCAAGCTGGAGATGCACTCGGGACGGCAAGTAACACGTTTGGCGTGTTAAATGATGCTGACCTGGAATTCCC
CGTTGTGGAAGATAATGATGGTCAGGCCGTTCAACTGTCTCAGGGTGTGTATGATCAGTTGATTCAATCCACCAAACCAG
CCGTACGTGAAATGGCCTTTAAACAGCTCTATGCCGTTTATCACCAATTCCGCCATACATTGGCTTCAACACTGGCTGGC
AACGTTAAAACGCATAATTTCAACGCTCAGGTGCGTTATTATGCTGATGCCCGTGAGGCAGCGTTGAGTGGCAATCACAT
CCCTGTGAGTGTGTATGACACGCTCGTCAAGGCGGTCAACGCCCATTTACCGTTACTGCACCGTTATGTGGCGCTTCGAA
AACGAATCTTGGGGTTGTCGGACCTTCATATGTATGATCTGTATACGCCAATTACCGGGGAACCACAATTAACCTACACC
TACGAGACTGCTCGTGATGAAGCACTTAAAGCTTTAGATGTGATGGGACCTGACTATCTATCCCACGTTAAAACAGCCTT
TGATTCACGCTGGATCGATGTTGTTGAGAACCAGGGAAAGCGTTCTGGTGGGTATTCATCTGGCATGTACGACACGGCAC
CGTATATTTTGCTGAACTGGCAGGATAATTTGGAAAGTTTGTACACCTTGGTTCATGAAATGGGTCACAGTATGCACAGC
TATTACAGTAGTCACAACCAGCCATATCAGTATGGCGACTATTCCATTTTCGTTGCCGAGATTGCATCCACGACTAATGA
AACGTTGTTGACGGACTATCTGCTGAAGACTTACGACGAGCCACAAGTTCAGGCCTTTGTGTTAAATCATTACCTGGACG
GCTTTAAGGGGACTGTCTTCCGCCAGACTCAGTTTGCTGAATTTGAGCAATTTATTCACGAGGAAGATGCAGCGGGACAC
CCGTTGACGGCGGATCATTTGAGTGATTACTATCTGAAGCTTAATCAGCGTTACTACGGTGATGCTGTTCAGTCTGATCC
GGAGATTGCGGACGAATGGGCCCGAATCCCGCATTTCTACTATAACTACTATGTTTACCAGTACGCCACCGGCTTCGCGG
CAGCGAATACGCTGGCAGACCGGATCCTTTCTGGGGACACTAGCAAGCGCGATGCTTATCTGAATTACCTGAAGTCGGGC
AGTTCTGATTATCCGATCGAAGTGATGAAGAAGGCGGGCGTAGACATGTCACAAGAGACCTATCTCGACCAGGCGTTTGA
CCAGTTTGAAGCACGGTTGAATCAGTTTGAAAAATTGGTAGAGCGTGAAGGAAAACGGTAG
TTGGCAGACGTCAAACAATTACCAACTCGTGATGAAGTAGATCCCAAATTCACGTGGGATCTCACACCAATTTATGCAAC
AACAGCCGACTTTGAAGGTGACTTCAACAAGGTCCAGGAGGCGATTCCTGAATTAGAAGACCTTCGTGGCTCTCTAGCGA
CTGGTGCTGATCAGCTGCTGCATGCGATCCAAAGCATTCTTAGCGTGATTCGACGAGCGGAAAAAGTCTATGTTTACGCG
TCTTTAAAGCACGATGAAAACACCGGAAATGCTGAGAATCAAGCGCTAAGCGGCCGAACGCAAACCTTATTTACCAGTCT
TGAAAGTGCCATTGCGTGGTTTGAACCAGAACTGCTGGCCATTGATAAGGCAACACTTGACAACATGCTGGCCCAAAACA
GTACCCTCGGTGAATACAAACACTATCTCGATACGATTACGGATCAGCGAGATCACGTTTTGGCCCCCAACGAAGAAAAA
TTATTGGCCCAAGCTGGAGATGCACTCGGGACGGCAAGTAACACGTTTGGCGTGTTAAATGATGCTGACCTGGAATTCCC
CGTTGTGGAAGATAATGATGGTCAGGCCGTTCAACTGTCTCAGGGTGTGTATGATCAGTTGATTCAATCCACCAAACCAG
CCGTACGTGAAATGGCCTTTAAACAGCTCTATGCCGTTTATCACCAATTCCGCCATACATTGGCTTCAACACTGGCTGGC
AACGTTAAAACGCATAATTTCAACGCTCAGGTGCGTTATTATGCTGATGCCCGTGAGGCAGCGTTGAGTGGCAATCACAT
CCCTGTGAGTGTGTATGACACGCTCGTCAAGGCGGTCAACGCCCATTTACCGTTACTGCACCGTTATGTGGCGCTTCGAA
AACGAATCTTGGGGTTGTCGGACCTTCATATGTATGATCTGTATACGCCAATTACCGGGGAACCACAATTAACCTACACC
TACGAGACTGCTCGTGATGAAGCACTTAAAGCTTTAGATGTGATGGGACCTGACTATCTATCCCACGTTAAAACAGCCTT
TGATTCACGCTGGATCGATGTTGTTGAGAACCAGGGAAAGCGTTCTGGTGGGTATTCATCTGGCATGTACGACACGGCAC
CGTATATTTTGCTGAACTGGCAGGATAATTTGGAAAGTTTGTACACCTTGGTTCATGAAATGGGTCACAGTATGCACAGC
TATTACAGTAGTCACAACCAGCCATATCAGTATGGCGACTATTCCATTTTCGTTGCCGAGATTGCATCCACGACTAATGA
AACGTTGTTGACGGACTATCTGCTGAAGACTTACGACGAGCCACAAGTTCAGGCCTTTGTGTTAAATCATTACCTGGACG
GCTTTAAGGGGACTGTCTTCCGCCAGACTCAGTTTGCTGAATTTGAGCAATTTATTCACGAGGAAGATGCAGCGGGACAC
CCGTTGACGGCGGATCATTTGAGTGATTACTATCTGAAGCTTAATCAGCGTTACTACGGTGATGCTGTTCAGTCTGATCC
GGAGATTGCGGACGAATGGGCCCGAATCCCGCATTTCTACTATAACTACTATGTTTACCAGTACGCCACCGGCTTCGCGG
CAGCGAATACGCTGGCAGACCGGATCCTTTCTGGGGACACTAGCAAGCGCGATGCTTATCTGAATTACCTGAAGTCGGGC
AGTTCTGATTATCCGATCGAAGTGATGAAGAAGGCGGGCGTAGACATGTCACAAGAGACCTATCTCGACCAGGCGTTTGA
CCAGTTTGAAGCACGGTTGAATCAGTTTGAAAAATTGGTAGAGCGTGAAGGAAAACGGTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pepF | Streptococcus salivarius strain HSISS4 |
50.759 |
97.855 |
0.497 |