Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | BS635_RS12585 | Genome accession | NZ_CP018323 |
| Coordinates | 2448099..2448539 (-) | Length | 146 a.a. |
| NCBI ID | WP_000360895.1 | Uniprot ID | B7LFX5 |
| Organism | Escherichia coli strain KSC9 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2443099..2453539
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BS635_RS12565 (BS635_12745) | coaE | 2443589..2444209 (-) | 621 | WP_001269520.1 | dephospho-CoA kinase | - |
| BS635_RS25870 | - | 2444234..2444278 (+) | 45 | WP_120795372.1 | protein YacM | - |
| BS635_RS12570 (BS635_12750) | guaC | 2444434..2445477 (+) | 1044 | WP_001217338.1 | GMP reductase | - |
| BS635_RS12575 (BS635_12755) | hofC | 2445512..2446714 (-) | 1203 | WP_000157236.1 | protein transport protein HofC | - |
| BS635_RS12580 (BS635_12760) | pilB | 2446704..2448089 (-) | 1386 | WP_001025174.1 | type II secretion system protein GspE | Machinery gene |
| BS635_RS12585 (BS635_12765) | pilA | 2448099..2448539 (-) | 441 | WP_000360895.1 | prepilin peptidase-dependent pilin | Machinery gene |
| BS635_RS12595 (BS635_12775) | nadC | 2448742..2449635 (-) | 894 | WP_001135174.1 | carboxylating nicotinate-nucleotide diphosphorylase | - |
| BS635_RS12600 (BS635_12780) | ampD | 2449723..2450274 (+) | 552 | WP_000923721.1 | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | - |
| BS635_RS12605 (BS635_12785) | ampE | 2450271..2451125 (+) | 855 | WP_000172000.1 | beta-lactamase regulator AmpE | - |
| BS635_RS12610 (BS635_12790) | aroP | 2451168..2452541 (-) | 1374 | WP_072133621.1 | aromatic amino acid transporter AroP | - |
Sequence
Protein
Download Length: 146 a.a. Molecular weight: 15602.71 Da Isoelectric Point: 4.3927
>NTDB_id=174956 BS635_RS12585 WP_000360895.1 2448099..2448539(-) (pilA) [Escherichia coli strain KSC9]
MDKQRGFTLIELMVVIGIIAILSAIGIPAYQNYLRKAALTDMLQTFVPYRTAVELCALEHGGLDTCDGGSNGIPSPTTTH
YVSAMSVAKGVVSLTGQESLNGLSVVMTPGWDNANGVTGWTRNCNIQSDSALQQACEDVFRFDDAN
MDKQRGFTLIELMVVIGIIAILSAIGIPAYQNYLRKAALTDMLQTFVPYRTAVELCALEHGGLDTCDGGSNGIPSPTTTH
YVSAMSVAKGVVSLTGQESLNGLSVVMTPGWDNANGVTGWTRNCNIQSDSALQQACEDVFRFDDAN
Nucleotide
Download Length: 441 bp
>NTDB_id=174956 BS635_RS12585 WP_000360895.1 2448099..2448539(-) (pilA) [Escherichia coli strain KSC9]
ATGGACAAGCAACGCGGTTTTACACTTATCGAACTGATGGTGGTTATTGGCATCATTGCCATTTTAAGCGCCATTGGTAT
TCCCGCTTATCAAAACTACCTGCGCAAAGCCGCACTCACCGACATGCTACAAACCTTTGTGCCTTACCGTACCGCCGTAG
AGTTGTGCGCGCTGGAACATGGTGGATTAGATACCTGCGACGGTGGCAGCAATGGCATTCCCTCGCCTACCACCACCCAC
TATGTTTCAGCCATGAGTGTGGCAAAAGGCGTGGTGTCGCTGACCGGGCAAGAAAGTCTCAATGGACTAAGCGTCGTCAT
GACACCGGGTTGGGATAACGCAAACGGCGTCACCGGCTGGACGCGCAACTGCAATATTCAAAGTGACAGCGCATTGCAGC
AAGCCTGCGAAGATGTCTTCCGCTTTGATGACGCCAACTAA
ATGGACAAGCAACGCGGTTTTACACTTATCGAACTGATGGTGGTTATTGGCATCATTGCCATTTTAAGCGCCATTGGTAT
TCCCGCTTATCAAAACTACCTGCGCAAAGCCGCACTCACCGACATGCTACAAACCTTTGTGCCTTACCGTACCGCCGTAG
AGTTGTGCGCGCTGGAACATGGTGGATTAGATACCTGCGACGGTGGCAGCAATGGCATTCCCTCGCCTACCACCACCCAC
TATGTTTCAGCCATGAGTGTGGCAAAAGGCGTGGTGTCGCTGACCGGGCAAGAAAGTCTCAATGGACTAAGCGTCGTCAT
GACACCGGGTTGGGATAACGCAAACGGCGTCACCGGCTGGACGCGCAACTGCAATATTCAAAGTGACAGCGCATTGCAGC
AAGCCTGCGAAGATGTCTTCCGCTTTGATGACGCCAACTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Haemophilus influenzae 86-028NP |
43.089 |
84.247 |
0.363 |