Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | A3224_RS02625 | Genome accession | NZ_CP014864 |
| Coordinates | 619516..620058 (+) | Length | 180 a.a. |
| NCBI ID | WP_067151105.1 | Uniprot ID | A0A143HJG4 |
| Organism | Microbulbifer thermotolerans strain DAU221 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 614516..625058
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A3224_RS02615 (A3224_02615) | - | 616697..618103 (+) | 1407 | WP_067151100.1 | mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase | - |
| A3224_RS02620 (A3224_02620) | - | 618242..619411 (+) | 1170 | WP_067151103.1 | MFS transporter | - |
| A3224_RS02625 (A3224_02625) | ssb | 619516..620058 (+) | 543 | WP_067151105.1 | single-stranded DNA-binding protein | Machinery gene |
| A3224_RS02630 (A3224_02630) | - | 620074..620928 (+) | 855 | WP_067151108.1 | sugar nucleotide-binding protein | - |
| A3224_RS02635 (A3224_02635) | fabB | 621005..622231 (-) | 1227 | WP_067151111.1 | beta-ketoacyl-ACP synthase I | - |
| A3224_RS02640 (A3224_02640) | fabA | 622314..622838 (-) | 525 | WP_067157329.1 | 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA | - |
| A3224_RS02645 (A3224_02645) | galU | 623119..623976 (+) | 858 | WP_067151114.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
Sequence
Protein
Download Length: 180 a.a. Molecular weight: 19594.41 Da Isoelectric Point: 4.9658
>NTDB_id=174811 A3224_RS02625 WP_067151105.1 619516..620058(+) (ssb) [Microbulbifer thermotolerans strain DAU221]
MASRGINKVILIGNLGSDPETRYMPSGGAVTNVSLATSESWKDKQTGQPQERTEWHRVVFFNRLAEIAGEYLRKGSKVYV
EGRLQTRKWQDQNGQDRYTTEIVANEMQMLDSRGEQGGFNQGMGGGQGGYQQQGGGQADPYAQGRSAPSPMAPSTNPSGQ
QPNQAPSGGFDNSFDDDIPF
MASRGINKVILIGNLGSDPETRYMPSGGAVTNVSLATSESWKDKQTGQPQERTEWHRVVFFNRLAEIAGEYLRKGSKVYV
EGRLQTRKWQDQNGQDRYTTEIVANEMQMLDSRGEQGGFNQGMGGGQGGYQQQGGGQADPYAQGRSAPSPMAPSTNPSGQ
QPNQAPSGGFDNSFDDDIPF
Nucleotide
Download Length: 543 bp
>NTDB_id=174811 A3224_RS02625 WP_067151105.1 619516..620058(+) (ssb) [Microbulbifer thermotolerans strain DAU221]
ATGGCCAGCAGGGGTATCAACAAAGTTATTCTGATCGGTAATCTGGGGTCAGACCCGGAAACCCGCTATATGCCCAGCGG
CGGCGCCGTGACCAATGTCAGCTTGGCGACGTCAGAGTCCTGGAAAGACAAGCAGACCGGGCAGCCCCAGGAGCGCACAG
AGTGGCATCGGGTGGTCTTTTTTAACCGCCTGGCCGAGATCGCCGGTGAGTATCTGCGCAAGGGCTCCAAAGTCTATGTA
GAGGGGCGCCTGCAGACCCGCAAGTGGCAGGATCAGAACGGCCAGGACCGCTATACCACGGAAATTGTGGCCAACGAGAT
GCAGATGCTCGACAGCCGCGGTGAGCAGGGCGGTTTTAATCAGGGCATGGGCGGCGGCCAGGGCGGCTATCAGCAGCAGG
GCGGCGGTCAGGCTGACCCCTATGCCCAAGGCCGATCAGCGCCCTCGCCGATGGCGCCTTCCACCAATCCGTCGGGACAG
CAGCCGAACCAGGCGCCCTCTGGTGGTTTCGACAACAGTTTCGATGACGATATTCCCTTCTAA
ATGGCCAGCAGGGGTATCAACAAAGTTATTCTGATCGGTAATCTGGGGTCAGACCCGGAAACCCGCTATATGCCCAGCGG
CGGCGCCGTGACCAATGTCAGCTTGGCGACGTCAGAGTCCTGGAAAGACAAGCAGACCGGGCAGCCCCAGGAGCGCACAG
AGTGGCATCGGGTGGTCTTTTTTAACCGCCTGGCCGAGATCGCCGGTGAGTATCTGCGCAAGGGCTCCAAAGTCTATGTA
GAGGGGCGCCTGCAGACCCGCAAGTGGCAGGATCAGAACGGCCAGGACCGCTATACCACGGAAATTGTGGCCAACGAGAT
GCAGATGCTCGACAGCCGCGGTGAGCAGGGCGGTTTTAATCAGGGCATGGGCGGCGGCCAGGGCGGCTATCAGCAGCAGG
GCGGCGGTCAGGCTGACCCCTATGCCCAAGGCCGATCAGCGCCCTCGCCGATGGCGCCTTCCACCAATCCGTCGGGACAG
CAGCCGAACCAGGCGCCCTCTGGTGGTTTCGACAACAGTTTCGATGACGATATTCCCTTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
56.989 |
100 |
0.589 |
| ssb | Glaesserella parasuis strain SC1401 |
58.333 |
100 |
0.583 |
| ssb | Neisseria gonorrhoeae MS11 |
48.619 |
100 |
0.489 |
| ssb | Neisseria meningitidis MC58 |
47.778 |
100 |
0.478 |