Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   A3L20_RS06435 Genome accession   NZ_CP014847
Coordinates   1254838..1255014 (+) Length   58 a.a.
NCBI ID   WP_001003335.1    Uniprot ID   A0A9W5VN58
Organism   Bacillus thuringiensis strain HD12     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1249838..1260014
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A3L20_RS06415 (A3L20_06415) clpC 1250169..1252769 (+) 2601 WP_000365378.1 ATP-dependent chaperone ClpB Regulator
  A3L20_RS06420 (A3L20_06420) - 1252808..1252990 (-) 183 WP_001211116.1 YjzD family protein -
  A3L20_RS06425 (A3L20_06425) - 1253147..1253881 (+) 735 WP_000028706.1 hypothetical protein -
  A3L20_RS06430 (A3L20_06430) - 1253911..1254783 (+) 873 WP_000486171.1 NAD-dependent epimerase/dehydratase family protein -
  A3L20_RS06435 (A3L20_06435) comZ 1254838..1255014 (+) 177 WP_001003335.1 ComZ family protein Regulator
  A3L20_RS06440 (A3L20_06440) fabH 1255246..1256178 (+) 933 WP_001100533.1 beta-ketoacyl-ACP synthase III -
  A3L20_RS06445 (A3L20_06445) fabF 1256210..1257448 (+) 1239 WP_000412645.1 beta-ketoacyl-ACP synthase II -
  A3L20_RS06450 (A3L20_06450) - 1257556..1258344 (+) 789 WP_000538198.1 DUF2268 domain-containing protein -
  A3L20_RS06455 (A3L20_06455) - 1258488..1259234 (+) 747 WP_000966119.1 YjbA family protein -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6575.71 Da        Isoelectric Point: 4.4184

>NTDB_id=174707 A3L20_RS06435 WP_001003335.1 1254838..1255014(+) (comZ) [Bacillus thuringiensis strain HD12]
MNEKSMQFLQIAMKHLPEAKAILDDNGIALDMEKAQPVLELLMKVMNEAYELGKADQQ

Nucleotide


Download         Length: 177 bp        

>NTDB_id=174707 A3L20_RS06435 WP_001003335.1 1254838..1255014(+) (comZ) [Bacillus thuringiensis strain HD12]
ATGAACGAAAAAAGCATGCAGTTTTTACAAATCGCAATGAAGCATTTACCAGAAGCAAAGGCCATTTTAGATGATAATGG
AATTGCGCTTGATATGGAGAAAGCACAACCAGTATTAGAGTTATTGATGAAAGTTATGAACGAAGCATATGAGCTTGGGA
AAGCAGATCAACAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.818

94.828

0.586

Multiple sequence alignment