Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | A3L20_RS00220 | Genome accession | NZ_CP014847 |
| Coordinates | 40736..41020 (-) | Length | 94 a.a. |
| NCBI ID | WP_000843036.1 | Uniprot ID | A0A9W5VII1 |
| Organism | Bacillus thuringiensis strain HD12 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 35736..46020
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A3L20_RS00185 (A3L20_00185) | tmk | 35928..36554 (+) | 627 | WP_000677218.1 | dTMP kinase | - |
| A3L20_RS00190 (A3L20_00190) | holB | 36590..37573 (+) | 984 | WP_000978578.1 | DNA polymerase III subunit delta' | - |
| A3L20_RS00195 (A3L20_00195) | - | 37579..38406 (+) | 828 | WP_000272429.1 | PSP1 domain-containing protein | - |
| A3L20_RS00200 (A3L20_00200) | yabA | 38421..38771 (+) | 351 | WP_000412063.1 | DNA replication initiation control protein YabA | - |
| A3L20_RS00205 (A3L20_00205) | - | 38854..39594 (+) | 741 | WP_001055355.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| A3L20_RS00210 (A3L20_00210) | - | 39581..39871 (+) | 291 | WP_000414350.1 | GIY-YIG nuclease family protein | - |
| A3L20_RS00215 (A3L20_00215) | rsmI | 39840..40715 (+) | 876 | WP_016078236.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| A3L20_RS00220 (A3L20_00220) | abrB | 40736..41020 (-) | 285 | WP_000843036.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Regulator |
| A3L20_RS00225 (A3L20_00225) | metG | 41507..43489 (+) | 1983 | WP_000134138.1 | methionine--tRNA ligase | - |
| A3L20_RS00230 (A3L20_00230) | - | 43656..44423 (+) | 768 | WP_000895845.1 | TatD family hydrolase | - |
| A3L20_RS00235 (A3L20_00235) | rnmV | 44639..45196 (+) | 558 | WP_000692841.1 | ribonuclease M5 | - |
Sequence
Protein
Download Length: 94 a.a. Molecular weight: 10490.17 Da Isoelectric Point: 4.7174
>NTDB_id=174696 A3L20_RS00220 WP_000843036.1 40736..41020(-) (abrB) [Bacillus thuringiensis strain HD12]
MKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDGNLSLAEGKIILSKEGAE
QILNELQDYIETAK
MKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDGNLSLAEGKIILSKEGAE
QILNELQDYIETAK
Nucleotide
Download Length: 285 bp
>NTDB_id=174696 A3L20_RS00220 WP_000843036.1 40736..41020(-) (abrB) [Bacillus thuringiensis strain HD12]
ATGAAATCTACTGGTATTGTTCGTAAAGTTGATGAATTAGGTCGTGTAGTAATTCCAATCGAATTACGCCGTACTTTAGG
TATTGCAGAAAAGGATGCTCTTGAAATCTATGTTGATGACGAGAAAATCATCTTAAAAAAATATAAACCAAACATGACTT
GCCAAGTAACTGGTGAAGTATCTGACGGTAACCTTTCTTTAGCTGAAGGTAAAATCATCTTAAGCAAAGAAGGCGCTGAG
CAAATCTTAAACGAACTTCAAGATTATATCGAAACAGCAAAATAA
ATGAAATCTACTGGTATTGTTCGTAAAGTTGATGAATTAGGTCGTGTAGTAATTCCAATCGAATTACGCCGTACTTTAGG
TATTGCAGAAAAGGATGCTCTTGAAATCTATGTTGATGACGAGAAAATCATCTTAAAAAAATATAAACCAAACATGACTT
GCCAAGTAACTGGTGAAGTATCTGACGGTAACCTTTCTTTAGCTGAAGGTAAAATCATCTTAAGCAAAGAAGGCGCTGAG
CAAATCTTAAACGAACTTCAAGATTATATCGAAACAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
85.106 |
100 |
0.851 |