Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   B14_RS15645 Genome accession   NZ_CP014842
Coordinates   3007106..3007276 (-) Length   56 a.a.
NCBI ID   WP_031314537.1    Uniprot ID   -
Organism   Bacillus licheniformis strain SCDB 14     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 3002106..3012276
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B14_RS15620 (B14_03127) - 3002405..3003379 (-) 975 WP_009328843.1 ABC transporter ATP-binding protein -
  B14_RS15625 (B14_03128) - 3003571..3004359 (-) 789 WP_009328844.1 DUF2268 domain-containing protein -
  B14_RS15630 (B14_03129) fabF 3004447..3005685 (-) 1239 WP_009328845.1 beta-ketoacyl-ACP synthase II -
  B14_RS15635 (B14_03130) - 3005707..3006645 (-) 939 WP_011197763.1 beta-ketoacyl-ACP synthase III -
  B14_RS15640 (B14_03131) - 3006815..3007054 (+) 240 WP_009328847.1 hypothetical protein -
  B14_RS15645 (B14_03132) comZ 3007106..3007276 (-) 171 WP_031314537.1 ComZ family protein Regulator
  B14_RS15650 (B14_03133) med 3007302..3008255 (-) 954 WP_009328848.1 BMP family ABC transporter substrate-binding protein Regulator
  B14_RS15655 (B14_03134) - 3008342..3008917 (-) 576 WP_016885912.1 hypothetical protein -
  B14_RS15660 (B14_03135) - 3009004..3009738 (-) 735 WP_009328850.1 hypothetical protein -
  B14_RS15665 (B14_03136) - 3009970..3010164 (+) 195 WP_009328851.1 YjzD family protein -
  B14_RS15670 (B14_03137) - 3010235..3010414 (-) 180 WP_003180573.1 YjzC family protein -
  B14_RS15675 (B14_03138) - 3010596..3011408 (+) 813 WP_003180571.1 undecaprenyl-diphosphate phosphatase -

Sequence

Protein


Download         Length: 56 a.a.        Molecular weight: 6274.27 Da        Isoelectric Point: 3.9646

>NTDB_id=174680 B14_RS15645 WP_031314537.1 3007106..3007276(-) (comZ) [Bacillus licheniformis strain SCDB 14]
MEFLQIAMKYVPEAKEEMEKAGIELSPEMLEPFMNLFTKVMAEAYELGKADAGSDA

Nucleotide


Download         Length: 171 bp        

>NTDB_id=174680 B14_RS15645 WP_031314537.1 3007106..3007276(-) (comZ) [Bacillus licheniformis strain SCDB 14]
ATGGAATTTTTGCAAATTGCCATGAAATACGTTCCGGAAGCGAAAGAAGAGATGGAGAAAGCGGGAATCGAACTTTCGCC
GGAAATGCTTGAGCCGTTCATGAACCTGTTTACAAAAGTGATGGCGGAAGCTTACGAGCTCGGTAAAGCGGACGCCGGTT
CTGACGCCTGA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(1-52)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

75

100

0.75

Multiple sequence alignment