Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | B14_RS00020 | Genome accession | NZ_CP014842 |
| Coordinates | 3773..6205 (-) | Length | 810 a.a. |
| NCBI ID | WP_003178275.1 | Uniprot ID | A0A1Y0YA38 |
| Organism | Bacillus licheniformis strain SCDB 14 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1..11205
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B14_RS00005 (B14_00001) | - | 14..1102 (-) | 1089 | WP_003178278.1 | PIN/TRAM domain-containing protein | - |
| B14_RS00010 (B14_00002) | disA | 1234..2310 (-) | 1077 | WP_003178277.1 | DNA integrity scanning diadenylate cyclase DisA | - |
| B14_RS00015 (B14_00003) | radA | 2314..3693 (-) | 1380 | WP_026699256.1 | DNA repair protein RadA | Machinery gene |
| B14_RS00020 (B14_00004) | clpC | 3773..6205 (-) | 2433 | WP_003178275.1 | ATP-dependent protease ATP-binding subunit ClpC | Regulator |
| B14_RS00025 (B14_00005) | - | 6202..7293 (-) | 1092 | WP_003178273.1 | protein arginine kinase | - |
| B14_RS00030 (B14_00006) | - | 7293..7847 (-) | 555 | WP_003178271.1 | UvrB/UvrC motif-containing protein | - |
| B14_RS00035 (B14_00007) | - | 7862..8326 (-) | 465 | WP_003178269.1 | CtsR family transcriptional regulator | - |
Sequence
Protein
Download Length: 810 a.a. Molecular weight: 90165.74 Da Isoelectric Point: 5.9538
>NTDB_id=174624 B14_RS00020 WP_003178275.1 3773..6205(-) (clpC) [Bacillus licheniformis strain SCDB 14]
MMFGRFTERAQKVLALAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLSPDKIQKEVESLIGRGQEMSQSIHY
TPRAKKVTELAMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNESGGAASGANSSANT
PTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVM
TLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEY
RKYIEKDAALERRFQPIQVDQPSPEESIQILKGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFLPDKAIDLIDEAGS
KVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREQVEETKKTWKEKQGQENSEVTVDDIAMVV
SSWTGVPVSKIAQTETDKLLNMESILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAE
SIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLT
DSKGRTVDFRNTILIMTSNVGASELRRNKYVGFNVQDETQNYKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLK
DIVSLMSDQLTKRLKEQDLSIELTEAAKEKIADEGVDLEYGARPLRRAIQKHVEDRLSEELLKGHIQKGQHIVLDVEDGE
FVVKTEAKTN
MMFGRFTERAQKVLALAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLSPDKIQKEVESLIGRGQEMSQSIHY
TPRAKKVTELAMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNESGGAASGANSSANT
PTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVM
TLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEY
RKYIEKDAALERRFQPIQVDQPSPEESIQILKGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFLPDKAIDLIDEAGS
KVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREQVEETKKTWKEKQGQENSEVTVDDIAMVV
SSWTGVPVSKIAQTETDKLLNMESILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAE
SIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLT
DSKGRTVDFRNTILIMTSNVGASELRRNKYVGFNVQDETQNYKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLK
DIVSLMSDQLTKRLKEQDLSIELTEAAKEKIADEGVDLEYGARPLRRAIQKHVEDRLSEELLKGHIQKGQHIVLDVEDGE
FVVKTEAKTN
Nucleotide
Download Length: 2433 bp
>NTDB_id=174624 B14_RS00020 WP_003178275.1 3773..6205(-) (clpC) [Bacillus licheniformis strain SCDB 14]
ATGATGTTTGGAAGATTCACAGAAAGAGCACAAAAAGTATTGGCGCTTGCTCAAGAAGAAGCTCTGCGTCTGGGCCATAA
TAACATTGGAACAGAACATATTCTCCTCGGCCTTGTCCGCGAGGGAGAAGGAATTGCTGCGAAAGCGCTGCAGGCGTTAG
GACTCAGCCCTGACAAGATTCAAAAAGAAGTTGAAAGCCTCATCGGCCGCGGACAAGAAATGTCACAATCGATCCATTAC
ACACCGAGAGCCAAGAAAGTGACCGAATTGGCGATGGATGAAGCGAGAAAGCTTGGCCACTCCTACGTTGGAACTGAACA
CATCCTCCTTGGCTTAATCCGCGAAGGGGAAGGTGTTGCGGCAAGGGTGCTGAATAATTTAGGCGTCAGCTTAAACAAAG
CGAGACAGCAAGTATTGCAGCTGTTGGGCAGCAATGAGAGCGGAGGCGCTGCTTCAGGCGCCAACAGTAGCGCCAACACA
CCAACTTTAGACAGTCTTGCCCGGGATCTCACGGCGATTGCAAAAGAAGACAGCCTTGATCCCGTGATCGGCAGAAGCAA
AGAAATTCAACGCGTGATTGAAGTGTTGAGCCGCAGAACGAAAAATAACCCTGTGTTAATCGGGGAGCCTGGTGTCGGTA
AGACTGCGATTGCCGAAGGCCTGGCCCAGCAGATCATCAATAACGAAGTACCGGAGATTTTACGCGACAAGCGCGTCATG
ACACTTGATATGGGAACGGTTGTCGCCGGCACGAAATATCGCGGTGAATTTGAAGACCGCCTGAAAAAAGTGATGGACGA
AATTCGTCAAGCGGGAAATATCATCCTCTTCATCGATGAGCTGCATACTCTCATCGGAGCCGGAGGAGCGGAAGGGGCCA
TCGATGCCTCCAATATCCTTAAACCGTCGCTGGCGCGCGGAGAGCTGCAATGCATCGGGGCGACAACCCTTGATGAATAC
CGCAAATACATTGAAAAAGATGCTGCACTAGAACGGCGTTTTCAGCCGATTCAGGTTGACCAGCCGTCTCCTGAAGAAAG
CATTCAAATATTGAAAGGGCTCAGAGACCGCTATGAAGCCCATCACCGCGTATCGATTACGGATGAAGCGATCGAAGCGG
CAGTAAAGCTGTCAGACCGCTACATTTCGGACCGTTTTCTGCCTGACAAGGCGATCGACTTAATCGATGAAGCCGGCTCA
AAGGTTAGACTGCGTTCATTCACAACGCCTCCTAACTTAAAAGAGCTTGAACAAAAGCTTGATGAGGTAAGGAAAGAAAA
AGATGCCGCTGTTCAAAGCCAGGAATTCGAAAAAGCAGCGTCTTTACGTGATACGGAGCAGCGCTTGCGTGAACAGGTCG
AAGAAACCAAGAAAACCTGGAAAGAAAAGCAAGGTCAAGAAAATTCCGAAGTGACCGTCGACGATATTGCAATGGTTGTA
TCAAGCTGGACCGGAGTGCCGGTTTCCAAAATTGCGCAGACCGAAACAGACAAATTGCTGAACATGGAGAGCATTCTTCA
TTCCCGCGTTATCGGCCAGGATGAGGCTGTCGTTGCAGTTGCAAAAGCAGTCAGACGCGCGCGTGCCGGCTTAAAAGATC
CAAAACGTCCTATCGGTTCGTTTATTTTCCTTGGCCCAACAGGCGTAGGGAAAACGGAGCTTGCCCGTGCACTTGCCGAG
TCCATTTTCGGCGATGAAGAAGCAATGATTCGCATCGATATGTCCGAGTACATGGAAAAACATTCAACATCAAGACTCGT
CGGTTCACCTCCTGGATATGTCGGCTATGATGAAGGCGGACAGCTCACTGAAAAAGTGAGAAGAAAACCGTATTCCGTCG
TCTTGCTTGATGAAATCGAGAAAGCTCACCCAGATGTCTTCAATATTTTGCTGCAGGTGCTTGAAGACGGCCGCCTGACT
GATTCAAAAGGGCGCACGGTTGACTTTAGGAATACGATTTTGATCATGACATCAAACGTCGGTGCGAGCGAACTGAGAAG
AAATAAATACGTCGGGTTTAATGTGCAGGATGAAACCCAGAATTATAAAGATATGAAAGACAAAGTCATGGGTGAACTAA
AACGCGCCTTTAGACCTGAATTTATCAACCGGATTGATGAGATCATCGTCTTCCACTCTTTGGAGAAAAAACATTTGAAA
GATATTGTATCCCTCATGTCAGACCAATTGACCAAGCGTCTGAAAGAACAGGATCTTTCAATTGAGCTGACTGAAGCGGC
TAAAGAAAAAATCGCCGATGAAGGCGTGGATCTCGAATACGGAGCGCGCCCTCTCAGAAGAGCAATCCAAAAACACGTGG
AAGACCGGCTGTCAGAAGAGCTCCTAAAAGGCCATATTCAAAAAGGCCAGCATATTGTTTTGGATGTAGAAGACGGAGAA
TTTGTCGTAAAAACCGAAGCTAAAACGAACTAA
ATGATGTTTGGAAGATTCACAGAAAGAGCACAAAAAGTATTGGCGCTTGCTCAAGAAGAAGCTCTGCGTCTGGGCCATAA
TAACATTGGAACAGAACATATTCTCCTCGGCCTTGTCCGCGAGGGAGAAGGAATTGCTGCGAAAGCGCTGCAGGCGTTAG
GACTCAGCCCTGACAAGATTCAAAAAGAAGTTGAAAGCCTCATCGGCCGCGGACAAGAAATGTCACAATCGATCCATTAC
ACACCGAGAGCCAAGAAAGTGACCGAATTGGCGATGGATGAAGCGAGAAAGCTTGGCCACTCCTACGTTGGAACTGAACA
CATCCTCCTTGGCTTAATCCGCGAAGGGGAAGGTGTTGCGGCAAGGGTGCTGAATAATTTAGGCGTCAGCTTAAACAAAG
CGAGACAGCAAGTATTGCAGCTGTTGGGCAGCAATGAGAGCGGAGGCGCTGCTTCAGGCGCCAACAGTAGCGCCAACACA
CCAACTTTAGACAGTCTTGCCCGGGATCTCACGGCGATTGCAAAAGAAGACAGCCTTGATCCCGTGATCGGCAGAAGCAA
AGAAATTCAACGCGTGATTGAAGTGTTGAGCCGCAGAACGAAAAATAACCCTGTGTTAATCGGGGAGCCTGGTGTCGGTA
AGACTGCGATTGCCGAAGGCCTGGCCCAGCAGATCATCAATAACGAAGTACCGGAGATTTTACGCGACAAGCGCGTCATG
ACACTTGATATGGGAACGGTTGTCGCCGGCACGAAATATCGCGGTGAATTTGAAGACCGCCTGAAAAAAGTGATGGACGA
AATTCGTCAAGCGGGAAATATCATCCTCTTCATCGATGAGCTGCATACTCTCATCGGAGCCGGAGGAGCGGAAGGGGCCA
TCGATGCCTCCAATATCCTTAAACCGTCGCTGGCGCGCGGAGAGCTGCAATGCATCGGGGCGACAACCCTTGATGAATAC
CGCAAATACATTGAAAAAGATGCTGCACTAGAACGGCGTTTTCAGCCGATTCAGGTTGACCAGCCGTCTCCTGAAGAAAG
CATTCAAATATTGAAAGGGCTCAGAGACCGCTATGAAGCCCATCACCGCGTATCGATTACGGATGAAGCGATCGAAGCGG
CAGTAAAGCTGTCAGACCGCTACATTTCGGACCGTTTTCTGCCTGACAAGGCGATCGACTTAATCGATGAAGCCGGCTCA
AAGGTTAGACTGCGTTCATTCACAACGCCTCCTAACTTAAAAGAGCTTGAACAAAAGCTTGATGAGGTAAGGAAAGAAAA
AGATGCCGCTGTTCAAAGCCAGGAATTCGAAAAAGCAGCGTCTTTACGTGATACGGAGCAGCGCTTGCGTGAACAGGTCG
AAGAAACCAAGAAAACCTGGAAAGAAAAGCAAGGTCAAGAAAATTCCGAAGTGACCGTCGACGATATTGCAATGGTTGTA
TCAAGCTGGACCGGAGTGCCGGTTTCCAAAATTGCGCAGACCGAAACAGACAAATTGCTGAACATGGAGAGCATTCTTCA
TTCCCGCGTTATCGGCCAGGATGAGGCTGTCGTTGCAGTTGCAAAAGCAGTCAGACGCGCGCGTGCCGGCTTAAAAGATC
CAAAACGTCCTATCGGTTCGTTTATTTTCCTTGGCCCAACAGGCGTAGGGAAAACGGAGCTTGCCCGTGCACTTGCCGAG
TCCATTTTCGGCGATGAAGAAGCAATGATTCGCATCGATATGTCCGAGTACATGGAAAAACATTCAACATCAAGACTCGT
CGGTTCACCTCCTGGATATGTCGGCTATGATGAAGGCGGACAGCTCACTGAAAAAGTGAGAAGAAAACCGTATTCCGTCG
TCTTGCTTGATGAAATCGAGAAAGCTCACCCAGATGTCTTCAATATTTTGCTGCAGGTGCTTGAAGACGGCCGCCTGACT
GATTCAAAAGGGCGCACGGTTGACTTTAGGAATACGATTTTGATCATGACATCAAACGTCGGTGCGAGCGAACTGAGAAG
AAATAAATACGTCGGGTTTAATGTGCAGGATGAAACCCAGAATTATAAAGATATGAAAGACAAAGTCATGGGTGAACTAA
AACGCGCCTTTAGACCTGAATTTATCAACCGGATTGATGAGATCATCGTCTTCCACTCTTTGGAGAAAAAACATTTGAAA
GATATTGTATCCCTCATGTCAGACCAATTGACCAAGCGTCTGAAAGAACAGGATCTTTCAATTGAGCTGACTGAAGCGGC
TAAAGAAAAAATCGCCGATGAAGGCGTGGATCTCGAATACGGAGCGCGCCCTCTCAGAAGAGCAATCCAAAAACACGTGG
AAGACCGGCTGTCAGAAGAGCTCCTAAAAGGCCATATTCAAAAAGGCCAGCATATTGTTTTGGATGTAGAAGACGGAGAA
TTTGTCGTAAAAACCGAAGCTAAAACGAACTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
96.049 |
100 |
0.96 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
50.25 |
98.765 |
0.496 |
| clpC | Streptococcus thermophilus LMG 18311 |
46.973 |
100 |
0.479 |
| clpC | Streptococcus thermophilus LMD-9 |
46.852 |
100 |
0.478 |
| clpC | Streptococcus pneumoniae Rx1 |
45.488 |
99.877 |
0.454 |
| clpC | Streptococcus pneumoniae D39 |
45.488 |
99.877 |
0.454 |
| clpC | Streptococcus pneumoniae TIGR4 |
45.365 |
99.877 |
0.453 |
| clpC | Streptococcus mutans UA159 |
43.847 |
100 |
0.453 |
| clpE | Streptococcus mutans UA159 |
53.621 |
80.123 |
0.43 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
48.324 |
88.395 |
0.427 |
| clpE | Streptococcus pneumoniae TIGR4 |
52.08 |
80.123 |
0.417 |
| clpE | Streptococcus pneumoniae Rx1 |
52.08 |
80.123 |
0.417 |
| clpE | Streptococcus pneumoniae D39 |
52.08 |
80.123 |
0.417 |
| clpE | Streptococcus pneumoniae R6 |
52.08 |
80.123 |
0.417 |