Detailed information NTG0174581

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: BCBMB205_RS17845
• Genome accession: NZ_CP014838
• Coordinates: 3581642..3582787 (+)
• Length: 381 a.a.
• NCBI ID: WP_074534220.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain CBMB205
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3576642..3587787

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BCBMB205_RS17820 (BCBMB205_36360)	-	3577539..3577967 (-)	429	WP_032869448.1	DUF1934 domain-containing protein	-
BCBMB205_RS17825 (BCBMB205_36370)	-	3578121..3578633 (+)	513	Protein_3427	bacteriocin biosynthesis protein AlbG	-
BCBMB205_RS17830 (BCBMB205_36380)	-	3578640..3580016 (-)	1377	WP_032875890.1	YncE family protein	-
BCBMB205_RS17835 (BCBMB205_36390)	-	3580056..3581411 (-)	1356	WP_032875887.1	YncE family protein	-
BCBMB205_RS17845 (BCBMB205_36400)	rapF	3581642..3582787 (+)	1146	WP_074534220.1	Rap family tetratricopeptide repeat protein	Regulator
BCBMB205_RS17850	-	3582771..3582890 (+)	120	WP_017418707.1	PhrC/PhrF family phosphatase-inhibitory pheromone	-
BCBMB205_RS17855 (BCBMB205_36410)	speB	3583013..3583885 (-)	873	WP_032875884.1	agmatinase	-
BCBMB205_RS17860 (BCBMB205_36420)	speE	3583944..3584774 (-)	831	WP_003151052.1	spermidine synthase	-
BCBMB205_RS17865 (BCBMB205_36430)	-	3584974..3587046 (+)	2073	WP_032875881.1	transglycosylase domain-containing protein	-
BCBMB205_RS17870 (BCBMB205_36440)	-	3587071..3587504 (-)	434	Protein_3435	hypothetical protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45737.21 Da
• Isoelectric Point: 5.0614

>NTDB_id=174581 BCBMB205_RS17845 WP_074534220.1 3581642..3582787(+) (rapF) [Bacillus velezensis strain CBMB205]
MASVLSSSAVGEKINEWYMYIRRFSIPDAEYLRREIKEELAGLEDDQDLHLYYSLMEFRHNLMLEYLEPLESQRIEEQPR
LSDLLADIDKKQARLTGRLDYYFNFFRGMYELECREYLSAIQFFKKAESKLTYVKDHIEKAEFYFKMSEVYYYMKQTYVS
MDYARQAYLIYKDAEKYNIRLTQCHSLFGANYLDVKQYDHAISHFQKAYTMAELEQQPQLMGRTLFNIALCHNNQNNKVE
AIPHLKEAIAVFEKAQMSHSLPQPYFLLTQIYFKLKNIDNAYDYHKKGISICKEIDDIIYEEKFKFLEYLYMPDPRDTLI
NDCLHFLENKLMYADIEELALDVAKYYYTQEEYKKASVYFLKVEEARQQIEGGVNLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=174581 BCBMB205_RS17845 WP_074534220.1 3581642..3582787(+) (rapF) [Bacillus velezensis strain CBMB205]
GTGGCGAGTGTTTTATCATCTTCAGCGGTTGGAGAAAAAATCAACGAATGGTATATGTACATTCGAAGGTTCAGCATCCC
GGACGCCGAGTACTTGCGGAGAGAAATCAAAGAAGAACTTGCAGGTCTGGAAGATGATCAGGATCTTCATCTATACTATT
CTCTCATGGAATTCCGTCACAATCTGATGCTCGAATACCTCGAACCGCTGGAATCGCAGCGGATAGAAGAACAGCCGAGA
CTATCGGATCTGCTCGCGGATATTGATAAAAAGCAGGCCCGGCTGACCGGACGTCTTGATTATTATTTTAATTTTTTCCG
GGGGATGTATGAGCTGGAATGCCGTGAATATCTTTCAGCGATTCAGTTTTTTAAGAAAGCTGAAAGCAAACTGACGTACG
TTAAAGATCATATAGAAAAAGCTGAATTTTACTTTAAAATGTCAGAAGTCTATTATTATATGAAACAAACTTATGTATCG
ATGGATTATGCGCGGCAGGCTTATTTAATTTATAAAGATGCAGAAAAATATAATATTAGATTAACCCAGTGCCATTCTTT
ATTTGGGGCTAATTATCTTGATGTAAAGCAATACGATCACGCGATTTCCCACTTTCAAAAGGCATATACGATGGCTGAAT
TGGAGCAGCAGCCGCAATTAATGGGGAGGACACTTTTTAACATCGCTTTATGCCATAATAATCAAAACAATAAAGTCGAG
GCTATTCCCCATTTAAAAGAAGCCATAGCTGTTTTTGAAAAAGCTCAAATGAGTCATTCACTTCCGCAGCCCTACTTCTT
ACTTACACAGATTTATTTTAAGTTAAAAAATATAGATAACGCGTACGATTATCATAAAAAAGGTATCTCAATATGTAAGG
AAATAGATGATATAATTTACGAGGAAAAATTTAAATTTTTAGAATACTTGTATATGCCGGATCCAAGAGATACATTAATA
AACGATTGTCTGCATTTTCTTGAAAATAAATTGATGTATGCTGATATTGAGGAATTAGCCCTTGATGTAGCTAAATATTA
TTACACACAAGAAGAATATAAAAAAGCTTCTGTCTACTTTTTAAAGGTTGAAGAAGCCAGACAGCAGATCGAAGGAGGAG
TGAATTTATATGAAATTGAAGTATAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

• Tetratricopeptide repeat (TPR_12) (188-254)

• Tetratricopeptide repeat (TPR_8) (265-293)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	70.079	100	0.701
rapC	Bacillus subtilis subsp. subtilis str. 168	54.211	99.738	0.541