Detailed information NTG0174574

Bioinformatically predicted

Overview

• Name: comFC
• Type: Machinery gene
• Locus tag: BCBMB205_RS16855
• Genome accession: NZ_CP014838
• Coordinates: 3390801..3391490 (-)
• Length: 229 a.a.
• NCBI ID: WP_196770545.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain CBMB205
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3385801..3396490

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BCBMB205_RS16820 (BCBMB205_34200)	fliW	3385892..3386323 (-)	432	WP_007407475.1	flagellar assembly protein FliW	-
BCBMB205_RS16825 (BCBMB205_34210)	-	3386353..3386922 (-)	570	WP_007407476.1	DUF6470 family protein	-
BCBMB205_RS16830 (BCBMB205_34220)	flgL	3387013..3387930 (-)	918	WP_003151396.1	flagellar hook-associated protein FlgL	-
BCBMB205_RS16835 (BCBMB205_34230)	flgK	3387942..3389459 (-)	1518	WP_032876170.1	flagellar hook-associated protein FlgK	-
BCBMB205_RS16840 (BCBMB205_34240)	-	3389475..3389957 (-)	483	WP_032876168.1	flagellar protein FlgN	-
BCBMB205_RS16845 (BCBMB205_34250)	flgM	3389972..3390238 (-)	267	WP_003151393.1	flagellar biosynthesis anti-sigma factor FlgM	-
BCBMB205_RS16850 (BCBMB205_34260)	-	3390308..3390727 (-)	420	WP_012118571.1	TIGR03826 family flagellar region protein	-
BCBMB205_RS16855 (BCBMB205_34270)	comFC	3390801..3391490 (-)	690	WP_196770545.1	phosphoribosyltransferase family protein	Machinery gene
BCBMB205_RS16860 (BCBMB205_34280)	-	3391496..3391780 (-)	285	WP_003151389.1	late competence development ComFB family protein	-
BCBMB205_RS16865 (BCBMB205_34290)	comFA	3391838..3393223 (-)	1386	WP_032876163.1	DEAD/DEAH box helicase	Machinery gene
BCBMB205_RS16870 (BCBMB205_34300)	-	3393332..3394180 (-)	849	WP_032876160.1	DegV family protein	-
BCBMB205_RS16875 (BCBMB205_34310)	degU	3394278..3394967 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
BCBMB205_RS16880 (BCBMB205_34320)	degS	3395044..3396207 (-)	1164	WP_007407484.1	two-component sensor histidine kinase DegS	Regulator

Sequence

Protein

• Length: 229 a.a.
• Molecular weight: 25274.96 Da
• Isoelectric Point: 8.4871

>NTDB_id=174574 BCBMB205_RS16855 WP_196770545.1 3390801..3391490(-) (comFC) [Bacillus velezensis strain CBMB205]
MNCLLCDSPISSSLTWRSLFSLAPEQEVCSICSSQFEKIEGPVCSICGRPQESNEKCADCAARESKTEKRFLLRQNRSVY
LYNDAMKDSLARFKFRGDAKIIQAFERDFAAGFKAAYPSNTHTLIPIPLSGERLAERGFNQSELLASLLGMPVIFPLIRL
NNEKQSKKSKTDRLSAEKKFSAAENSAKGMNVILIDDIYTTGATLHQAAEVLLTAGKASSVSSFTLIRS

Nucleotide

• Length: 690 bp

>NTDB_id=174574 BCBMB205_RS16855 WP_196770545.1 3390801..3391490(-) (comFC) [Bacillus velezensis strain CBMB205]
CTGAATTGTTTATTGTGTGACTCACCAATTTCAAGTTCATTGACTTGGAGATCTCTGTTTTCTCTGGCGCCCGAGCAAGA
GGTATGCAGCATATGCAGCAGCCAATTCGAAAAAATTGAAGGCCCCGTATGCAGTATATGCGGGAGGCCTCAGGAGTCAA
ATGAAAAATGCGCTGATTGTGCGGCCCGGGAATCAAAAACGGAAAAGCGCTTTTTGCTGCGGCAAAACCGTTCGGTATAT
TTGTATAATGATGCGATGAAGGACTCATTGGCCCGGTTTAAATTCAGGGGTGATGCGAAAATCATTCAAGCATTTGAACG
TGACTTTGCTGCCGGCTTTAAAGCGGCATATCCATCAAATACACATACTCTCATCCCTATTCCGCTGAGCGGCGAACGGC
TGGCCGAACGCGGATTCAATCAATCCGAGCTGCTGGCCTCTCTGCTCGGAATGCCCGTCATTTTCCCCCTCATCCGACTG
AACAACGAAAAACAATCCAAAAAGAGCAAAACAGACAGGCTGTCTGCAGAAAAAAAGTTTTCAGCAGCCGAAAACTCCGC
CAAAGGTATGAACGTCATCTTAATAGATGATATTTATACGACGGGCGCCACACTTCACCAAGCCGCCGAAGTCCTGCTGA
CAGCGGGCAAAGCGTCATCGGTCTCCTCTTTTACTTTAATCAGGAGCTAA

Domains

Predicted by InterproScan.

• Phosphoribosyl transferase domain (Pribosyltran) (144-227)

• Double zinc ribbon domain (DZR_2) (2-61)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC	Bacillus subtilis subsp. subtilis str. 168	59.912	99.127	0.594