Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   A2G56_RS05315 Genome accession   NZ_CP014835
Coordinates   1209045..1209764 (-) Length   239 a.a.
NCBI ID   WP_062710057.1    Uniprot ID   -
Organism   Streptococcus halotolerans strain HTS9     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1204045..1214764
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A2G56_RS05275 rimP 1204349..1204837 (-) 489 WP_082785113.1 ribosome maturation factor RimP -
  A2G56_RS05285 - 1205152..1205598 (-) 447 WP_062710045.1 pyridoxamine 5'-phosphate oxidase family protein -
  A2G56_RS05290 - 1206144..1206394 (+) 251 Protein_1062 tyrosine-type recombinase/integrase -
  A2G56_RS05300 trmB 1206536..1207171 (-) 636 WP_062710051.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  A2G56_RS05305 ccrZ 1207168..1207917 (-) 750 WP_418080412.1 cell cycle regulator CcrZ -
  A2G56_RS05310 - 1208009..1209043 (-) 1035 WP_062710054.1 ABC transporter permease -
  A2G56_RS05315 pptA 1209045..1209764 (-) 720 WP_062710057.1 ABC transporter ATP-binding protein Regulator
  A2G56_RS05320 - 1210368..1210820 (-) 453 WP_062710060.1 type II toxin-antitoxin system HicB family antitoxin -
  A2G56_RS05325 - 1211478..1211888 (-) 411 WP_062710063.1 DUF1492 domain-containing protein -
  A2G56_RS05330 - 1212014..1212646 (-) 633 WP_062710067.1 hypothetical protein -
  A2G56_RS05335 - 1212692..1213495 (-) 804 WP_062710070.1 hypothetical protein -
  A2G56_RS05345 - 1213999..1214253 (-) 255 WP_062710076.1 hypothetical protein -
  A2G56_RS05350 - 1214255..1214434 (-) 180 WP_062710078.1 hypothetical protein -

Sequence

Protein


Download         Length: 239 a.a.        Molecular weight: 26875.30 Da        Isoelectric Point: 4.6563

>NTDB_id=174471 A2G56_RS05315 WP_062710057.1 1209045..1209764(-) (pptA) [Streptococcus halotolerans strain HTS9]
MLKIDHLVGGYVNIPVLKDISFEVASGEVVGLIGLNGAGKSTTINEIIGLLQPYQGSVSLEGLQLLENPEGYRRKIGYIP
ETPILYEELTLKEHLDTVALAYGLEEQKELRQKLLKLFRLEDKLDWYPIHFSKGMKQKVMIIAALLIEPSLLIVDEPFLG
LDPLAIRDLTDIIAEEKLKGTAVLMSTHVLDSAEKMCDRFVILHHGEILANGSLEELRQQFRLPNADLTEIYMQLTQEN

Nucleotide


Download         Length: 720 bp        

>NTDB_id=174471 A2G56_RS05315 WP_062710057.1 1209045..1209764(-) (pptA) [Streptococcus halotolerans strain HTS9]
ATGTTAAAAATAGATCACTTGGTTGGTGGTTATGTTAATATTCCTGTTTTAAAAGATATTTCTTTTGAGGTTGCTTCTGG
GGAAGTTGTTGGTTTAATCGGTCTAAACGGTGCTGGTAAATCGACCACAATCAATGAGATTATTGGCCTTTTGCAGCCCT
ATCAAGGAAGTGTGAGTTTAGAAGGCTTGCAATTATTGGAGAATCCAGAAGGTTACCGCCGCAAAATTGGTTACATCCCT
GAGACACCAATCCTGTACGAAGAATTAACCCTGAAAGAACATTTGGATACAGTCGCCCTAGCCTATGGTTTAGAGGAACA
AAAGGAACTGCGTCAGAAACTTTTAAAGCTCTTTCGTTTGGAAGATAAGCTAGATTGGTATCCCATCCATTTTTCAAAAG
GGATGAAACAGAAGGTTATGATTATTGCAGCTCTTTTAATTGAGCCAAGTTTATTGATTGTTGATGAACCCTTTTTAGGG
CTTGATCCTCTAGCTATTAGAGATTTGACTGATATTATTGCCGAAGAAAAACTAAAAGGAACAGCAGTACTTATGAGCAC
ACATGTCCTTGATTCAGCGGAGAAAATGTGTGATCGTTTTGTCATTCTTCATCATGGTGAAATCCTAGCCAATGGTAGCT
TAGAAGAACTGCGTCAGCAGTTTCGGTTACCTAACGCTGATTTAACCGAGATTTACATGCAATTGACACAGGAGAATTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-158)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

69.456

100

0.695
  pptA Streptococcus thermophilus LMD-9

68.619

100

0.686

Multiple sequence alignment