Detailed information    

insolico Bioinformatically predicted

Overview

Name   pepF   Type   Regulator
Locus tag   A2G56_RS00690 Genome accession   NZ_CP014835
Coordinates   159539..161341 (+) Length   600 a.a.
NCBI ID   WP_062707631.1    Uniprot ID   -
Organism   Streptococcus halotolerans strain HTS9     
Function   degradation of XIP; competence shut-off (predicted from homology)   
Competence regulation

Genomic Context

Location: 154539..166341
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A2G56_RS00665 - 154917..155214 (+) 298 Protein_133 transposase -
  A2G56_RS00670 queA 155407..156453 (-) 1047 WP_062707618.1 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA -
  A2G56_RS00675 nagB 156626..157330 (+) 705 WP_062707621.1 glucosamine-6-phosphate deaminase -
  A2G56_RS00680 - 157375..158331 (-) 957 WP_062707626.1 glutathione S-transferase family protein -
  A2G56_RS00685 - 158580..159542 (+) 963 WP_062707629.1 competence protein CoiA -
  A2G56_RS00690 pepF 159539..161341 (+) 1803 WP_062707631.1 oligoendopeptidase F Regulator
  A2G56_RS00695 - 161357..161764 (+) 408 WP_237334423.1 hypothetical protein -
  A2G56_RS00700 - 162374..162988 (+) 615 WP_062707634.1 HAD-IA family hydrolase -
  A2G56_RS00705 - 163125..163832 (+) 708 WP_062712295.1 O-methyltransferase -
  A2G56_RS00710 prsA 163930..164859 (+) 930 WP_062707637.1 peptidylprolyl isomerase PrsA -
  A2G56_RS00715 - 165093..165590 (+) 498 WP_062712297.1 LURP-one-related family protein -

Sequence

Protein


Download         Length: 600 a.a.        Molecular weight: 69152.93 Da        Isoelectric Point: 4.5811

>NTDB_id=174453 A2G56_RS00690 WP_062707631.1 159539..161341(+) (pepF) [Streptococcus halotolerans strain HTS9]
MTDNRSHLKKEETWDLTTIFETDEAWEAERQALENDLKASQSNAGHLLDSAKSLLRITETALELMRRLEKLYVYASMKND
QDTTIATYQEMEAKATALSSLYSQTFAFYEPEFLTMSEQQLEDYKAEEPGLLSYDHYFEKLLATKDHVLPKEAEELLAGA
SEIFGSAAETFSIFDNADVTYPWVTNDEGDLVELTHGNFISLMESKNREVRKGAYDAYYGVYEQFQHTYAKTLQTNVKVH
NYQAKVRGYESARHAALSANFIPEEVYDTLLAVVNKHLPLLHRYMKLRQELLGLDDLKMYDVYTPLSEHDMAITYPEALE
KSRQVLTVFGKDYSDRVDRAFSERWIDVHVNKGKRSGAYSGGSYDTNAFMLLNWQDTLDNLYTLIHETGHSLHSTFTREN
QPYVYGDYSIFLAEIASTTNENILTETLLEEVTDDKERFAILNHYLDGFKGTIFRQTQFAEFELAIHQADQEGKVLTSDF
LNQTYAKLNEKYYGLAADDNHNIQFEWARIPHFYYNFYVYQYATGFAAASYLADRIVHGTDQDRENYLDYLKAGNSDYPL
NVIAKAGVDMTSADYLEGAFKVFKQRLEELEALVAKREVN

Nucleotide


Download         Length: 1803 bp        

>NTDB_id=174453 A2G56_RS00690 WP_062707631.1 159539..161341(+) (pepF) [Streptococcus halotolerans strain HTS9]
ATGACTGATAATCGTAGCCATCTGAAAAAAGAAGAAACCTGGGATTTGACTACCATTTTTGAAACGGATGAGGCGTGGGA
AGCAGAGCGCCAAGCGTTAGAAAACGATTTGAAAGCTTCTCAAAGTAATGCAGGCCACCTTTTGGATTCAGCTAAGAGTT
TATTGCGTATTACGGAAACTGCTCTAGAGTTGATGCGTCGTTTAGAGAAACTATATGTGTACGCATCTATGAAAAATGAT
CAAGATACAACGATTGCAACTTATCAAGAGATGGAAGCAAAAGCGACAGCCTTATCGTCACTTTATAGTCAGACCTTTGC
TTTTTATGAACCTGAATTTTTGACCATGTCAGAGCAGCAACTAGAAGACTATAAGGCAGAAGAGCCTGGCCTTCTTTCTT
ATGATCATTATTTTGAAAAATTATTAGCCACTAAAGATCATGTCTTGCCGAAAGAGGCTGAAGAATTATTGGCAGGTGCC
TCTGAGATTTTTGGTTCTGCTGCTGAAACCTTCTCTATCTTTGATAATGCTGATGTGACCTATCCTTGGGTTACCAATGA
TGAGGGAGACCTTGTGGAATTAACCCATGGTAATTTTATTAGCCTTATGGAATCTAAAAATCGAGAAGTTCGTAAAGGTG
CCTATGATGCTTACTATGGTGTTTATGAGCAGTTCCAACACACCTATGCTAAAACCTTACAAACCAATGTCAAGGTTCAT
AATTACCAAGCGAAAGTTCGTGGGTATGAATCAGCTCGCCATGCCGCTCTTTCGGCTAATTTCATTCCTGAAGAGGTTTA
CGATACCTTACTGGCAGTTGTGAATAAGCACTTGCCACTCTTACATCGTTACATGAAGTTACGCCAAGAGTTACTGGGTC
TTGATGATCTCAAGATGTATGACGTTTATACGCCGCTTTCAGAGCATGATATGGCTATTACTTATCCAGAAGCACTTGAA
AAATCTCGTCAAGTCTTGACAGTGTTTGGTAAAGATTATAGTGATCGCGTTGATCGTGCCTTTTCAGAGCGCTGGATTGA
TGTTCATGTTAATAAGGGCAAGCGCTCAGGAGCATATTCGGGTGGTTCATACGATACCAATGCCTTTATGCTGCTCAACT
GGCAGGATACTTTAGATAATCTTTATACCTTGATTCATGAAACAGGCCATAGCTTACATTCAACTTTTACTCGTGAAAAT
CAACCCTATGTCTATGGGGATTACAGCATTTTCTTGGCTGAGATTGCCTCAACAACCAATGAAAATATCTTGACGGAAAC
TCTGCTCGAAGAGGTGACTGATGATAAAGAACGCTTCGCTATTCTCAATCACTATTTGGATGGCTTTAAAGGAACTATCT
TCCGTCAAACACAGTTTGCAGAATTTGAATTGGCCATTCATCAGGCTGACCAAGAAGGAAAAGTCTTGACCAGTGATTTT
CTTAACCAAACATACGCTAAACTTAACGAAAAATATTATGGTTTAGCAGCTGATGATAATCATAACATTCAGTTTGAGTG
GGCTCGTATTCCGCATTTTTACTATAATTTCTATGTTTATCAATATGCGACTGGGTTTGCAGCAGCTTCCTACCTAGCAG
ACAGAATTGTCCATGGAACAGACCAAGACCGAGAAAACTATCTAGATTATCTTAAAGCTGGTAATTCGGATTACCCACTG
AATGTCATCGCTAAAGCAGGTGTTGATATGACAAGCGCTGATTACTTAGAAGGAGCTTTCAAAGTATTTAAGCAACGCTT
GGAAGAATTGGAAGCATTGGTGGCAAAACGAGAAGTCAACTAA

Domains

Predicted by InterproScan.

Oligopeptidase F (Peptidase_M3_N)

(112-180)

Peptidase family M3 (Peptidase_M3)

(202-580)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pepF Streptococcus salivarius strain HSISS4

71.477

99.333

0.71

Multiple sequence alignment