Detailed information    

insolico Bioinformatically predicted

Overview


Name   ceuB   Type   Machinery gene
Locus tag   A1140_RS09885 Genome accession   NZ_CP014834
Coordinates   2051288..2052256 (-) Length   322 a.a.
NCBI ID   WP_115926652.1    Uniprot ID   -
Organism   Staphylococcus felis strain BN1     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 2046288..2057256
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A1140_RS09860 (A1140_09680) - 2047168..2047797 (-) 630 WP_115902931.1 nitroreductase family protein -
  A1140_RS09865 (A1140_09685) - 2047931..2048371 (+) 441 WP_115856471.1 MarR family transcriptional regulator -
  A1140_RS09870 (A1140_09690) - 2048487..2049521 (-) 1035 WP_115890334.1 ABC transporter substrate-binding protein -
  A1140_RS09875 (A1140_09695) - 2049524..2050342 (-) 819 WP_349420911.1 ATP-binding cassette domain-containing protein -
  A1140_RS09880 (A1140_09700) - 2050339..2051304 (-) 966 WP_232618932.1 iron chelate uptake ABC transporter family permease subunit -
  A1140_RS09885 (A1140_09705) ceuB 2051288..2052256 (-) 969 WP_115926652.1 ABC transporter permease Machinery gene
  A1140_RS09890 - 2052460..2052636 (-) 177 WP_167388987.1 hypothetical protein -
  A1140_RS09895 (A1140_09710) - 2052858..2053541 (-) 684 WP_103210063.1 LrgB family protein -
  A1140_RS09900 (A1140_09715) - 2053541..2053930 (-) 390 WP_232332032.1 CidA/LrgA family protein -
  A1140_RS09905 (A1140_09720) - 2054047..2054928 (-) 882 WP_103210067.1 LysR family transcriptional regulator -
  A1140_RS09910 (A1140_09725) - 2055370..2055792 (-) 423 WP_103210069.1 universal stress protein -
  A1140_RS09915 (A1140_09730) - 2056009..2057244 (+) 1236 WP_115856472.1 aminoacyltransferase -

Sequence


Protein


Download         Length: 322 a.a.        Molecular weight: 35346.70 Da        Isoelectric Point: 9.7035

>NTDB_id=174449 A1140_RS09885 WP_115926652.1 2051288..2052256(-) (ceuB) [Staphylococcus felis strain BN1]
MRILMNGYVLLVILCILTVCSLFIGVSSVSVADVFRLDDKQLNILFASRIPRTVSILIAGSSLALSGLIMQQMMQNKFVS
PTTAGTMEWAKLGILISLIFFPSQHILLKLIFAVLCSVIGTFLFVQIIQRIQFKDVVFVPLVGIMIGGIVSSFSTFIALQ
TNAVQSIGNWLNGNFAIITSGRYEVLYLSLPLLILTYVYANQFTIAGMGRDFSQSLGLNYQFVMNMGLMIIATITALVVV
TVGTLPFLGLIVPNIVAIFKGDHLKFALPHTAMLGAIFVMISDILGRLIVYPYEINIGLTIGVFGTVIFILMLMKGRHQY
AQ

Nucleotide


Download         Length: 969 bp        

>NTDB_id=174449 A1140_RS09885 WP_115926652.1 2051288..2052256(-) (ceuB) [Staphylococcus felis strain BN1]
ATGCGAATTTTAATGAATGGTTATGTTTTATTGGTCATCCTCTGTATTCTTACTGTTTGTTCCTTATTTATTGGTGTGAG
TAGTGTTTCGGTAGCGGATGTGTTTCGTTTGGATGATAAGCAACTTAATATTTTATTTGCTAGTCGTATTCCTAGAACGG
TAAGTATCCTTATTGCTGGTAGTAGCCTAGCTTTGTCAGGATTAATAATGCAACAGATGATGCAAAATAAATTCGTGAGT
CCGACGACTGCAGGAACGATGGAGTGGGCGAAACTTGGGATATTGATTTCGTTGATTTTTTTTCCATCGCAGCATATTTT
GTTGAAGCTCATCTTTGCGGTTCTCTGTAGTGTGATAGGAACATTTTTATTTGTTCAAATTATTCAACGTATTCAGTTTA
AAGACGTGGTTTTTGTCCCTTTAGTTGGCATTATGATAGGTGGTATTGTTTCTAGTTTTTCAACGTTTATCGCTTTACAA
ACAAATGCTGTACAAAGTATTGGAAACTGGTTAAATGGCAATTTTGCGATTATTACAAGTGGGCGATATGAAGTTTTATA
TCTTAGTTTACCGCTACTCATATTGACATATGTATACGCTAATCAGTTTACAATAGCAGGTATGGGACGTGATTTTAGCC
AAAGTTTAGGTTTGAATTATCAATTTGTTATGAATATGGGATTAATGATTATTGCAACAATTACTGCATTAGTTGTTGTA
ACTGTCGGAACGTTACCTTTTTTAGGTTTGATTGTCCCAAATATAGTAGCTATTTTTAAAGGTGATCACTTAAAGTTTGC
TTTGCCTCACACAGCGATGCTCGGAGCGATTTTTGTAATGATTTCAGATATTTTAGGTCGTTTAATCGTTTATCCATATG
AAATCAATATTGGTCTAACAATTGGTGTATTTGGAACTGTGATTTTCATCTTAATGTTGATGAAAGGGCGTCATCAATAT
GCACAATAA

Domains


Predicted by InterproScan.

(14-315)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

49.521

97.205

0.481


Multiple sequence alignment