Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | A1140_RS05605 | Genome accession | NZ_CP014834 |
| Coordinates | 1168398..1169372 (-) | Length | 324 a.a. |
| NCBI ID | WP_103210249.1 | Uniprot ID | - |
| Organism | Staphylococcus felis strain BN1 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1163398..1174372
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A1140_RS05585 (A1140_05485) | gcvPA | 1164763..1166112 (-) | 1350 | WP_115856044.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| A1140_RS05590 (A1140_05490) | gcvT | 1166125..1167216 (-) | 1092 | WP_349421334.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| A1140_RS05595 (A1140_05495) | - | 1167372..1167833 (-) | 462 | WP_349421335.1 | shikimate kinase | - |
| A1140_RS05600 (A1140_05500) | - | 1167953..1168429 (-) | 477 | WP_349421336.1 | type II secretion system F family protein | - |
| A1140_RS05605 (A1140_05505) | comGA | 1168398..1169372 (-) | 975 | WP_103210249.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| A1140_RS05610 (A1140_05510) | - | 1169436..1170059 (-) | 624 | WP_103210250.1 | MBL fold metallo-hydrolase | - |
| A1140_RS05615 (A1140_05515) | - | 1170082..1170393 (-) | 312 | WP_103210252.1 | MTH1187 family thiamine-binding protein | - |
| A1140_RS05620 (A1140_05520) | - | 1170399..1171379 (-) | 981 | WP_115856039.1 | ROK family glucokinase | - |
| A1140_RS05625 (A1140_05525) | - | 1171376..1171579 (-) | 204 | WP_103210261.1 | YqgQ family protein | - |
| A1140_RS05630 (A1140_05530) | - | 1171569..1173020 (-) | 1452 | WP_106465137.1 | rhomboid family intramembrane serine protease | - |
| A1140_RS05635 (A1140_05535) | - | 1173037..1173576 (-) | 540 | WP_103209202.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| A1140_RS05640 (A1140_05540) | rpmG | 1173704..1173853 (-) | 150 | WP_103209204.1 | 50S ribosomal protein L33 | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 36744.47 Da Isoelectric Point: 7.5019
>NTDB_id=174435 A1140_RS05605 WP_103210249.1 1168398..1169372(-) (comGA) [Staphylococcus felis strain BN1]
MQLLLDNVLQYALSQNASDIHFIPSHSQVEVKLRVKDALILYDTLNIDTYRKLITLLKYQAGLDVSSRHKAQSGRYIYEH
QSLYFLRVSTLPLNLGIESCVIRITPQYFQSSSNEATNDIKKIMEKKQGLILFSGPTGAGKSTLMYQMVLYAKEHLNLNI
ITIEDPVEQILNGITQISVNEKANITYGTSLKAILRCDPDVILIGEIRDAKIAKDVIQASLSGHLVLSTIHATDCSGVLL
RLLEMGITKQDLTQAVNLVINQRLVTTKSYDRQLVYETMRHPEIQYFLTHNYQLPNEFISLVDKLSSLEKEGVIDETTLR
KYQK
MQLLLDNVLQYALSQNASDIHFIPSHSQVEVKLRVKDALILYDTLNIDTYRKLITLLKYQAGLDVSSRHKAQSGRYIYEH
QSLYFLRVSTLPLNLGIESCVIRITPQYFQSSSNEATNDIKKIMEKKQGLILFSGPTGAGKSTLMYQMVLYAKEHLNLNI
ITIEDPVEQILNGITQISVNEKANITYGTSLKAILRCDPDVILIGEIRDAKIAKDVIQASLSGHLVLSTIHATDCSGVLL
RLLEMGITKQDLTQAVNLVINQRLVTTKSYDRQLVYETMRHPEIQYFLTHNYQLPNEFISLVDKLSSLEKEGVIDETTLR
KYQK
Nucleotide
Download Length: 975 bp
>NTDB_id=174435 A1140_RS05605 WP_103210249.1 1168398..1169372(-) (comGA) [Staphylococcus felis strain BN1]
ATGCAACTATTATTAGATAACGTTTTACAATACGCACTAAGCCAAAATGCTTCAGACATTCACTTTATTCCATCTCATTC
ACAAGTTGAAGTGAAATTAAGAGTTAAAGATGCACTGATTTTATATGACACATTAAATATAGATACATACAGAAAATTGA
TTACACTATTAAAATATCAAGCAGGTTTAGATGTATCTTCTCGTCACAAAGCTCAAAGTGGTCGATATATTTATGAACAT
CAATCGCTTTATTTTTTACGCGTATCTACACTGCCACTTAATTTAGGCATAGAAAGTTGTGTCATCCGTATAACTCCTCA
ATACTTTCAATCATCTTCCAATGAAGCCACAAATGATATCAAGAAAATTATGGAGAAAAAGCAAGGATTAATTTTATTTA
GTGGTCCAACAGGTGCTGGTAAAAGTACATTGATGTATCAGATGGTGTTGTATGCAAAAGAGCATTTAAACCTCAATATC
ATTACCATTGAAGACCCCGTGGAACAGATTTTAAATGGCATTACTCAAATTTCAGTGAATGAAAAAGCAAATATTACTTA
TGGAACCTCATTAAAAGCGATATTACGATGTGATCCAGATGTTATCTTAATCGGCGAAATACGAGACGCAAAAATTGCCA
AAGATGTGATACAAGCGAGTTTGAGTGGACATCTCGTCTTATCAACAATCCACGCTACAGATTGTAGTGGCGTTCTTCTT
AGGTTACTTGAGATGGGGATTACAAAGCAAGATTTAACTCAAGCTGTTAATCTTGTGATCAATCAAAGATTAGTTACCAC
AAAGAGTTATGATCGACAACTTGTTTACGAAACGATGAGACATCCAGAAATACAATATTTTCTTACGCATAATTATCAAC
TCCCTAATGAATTTATAAGCTTAGTAGATAAGCTATCTTCATTAGAAAAAGAAGGCGTTATTGATGAAACAACTTTACGA
AAATATCAAAAATAA
ATGCAACTATTATTAGATAACGTTTTACAATACGCACTAAGCCAAAATGCTTCAGACATTCACTTTATTCCATCTCATTC
ACAAGTTGAAGTGAAATTAAGAGTTAAAGATGCACTGATTTTATATGACACATTAAATATAGATACATACAGAAAATTGA
TTACACTATTAAAATATCAAGCAGGTTTAGATGTATCTTCTCGTCACAAAGCTCAAAGTGGTCGATATATTTATGAACAT
CAATCGCTTTATTTTTTACGCGTATCTACACTGCCACTTAATTTAGGCATAGAAAGTTGTGTCATCCGTATAACTCCTCA
ATACTTTCAATCATCTTCCAATGAAGCCACAAATGATATCAAGAAAATTATGGAGAAAAAGCAAGGATTAATTTTATTTA
GTGGTCCAACAGGTGCTGGTAAAAGTACATTGATGTATCAGATGGTGTTGTATGCAAAAGAGCATTTAAACCTCAATATC
ATTACCATTGAAGACCCCGTGGAACAGATTTTAAATGGCATTACTCAAATTTCAGTGAATGAAAAAGCAAATATTACTTA
TGGAACCTCATTAAAAGCGATATTACGATGTGATCCAGATGTTATCTTAATCGGCGAAATACGAGACGCAAAAATTGCCA
AAGATGTGATACAAGCGAGTTTGAGTGGACATCTCGTCTTATCAACAATCCACGCTACAGATTGTAGTGGCGTTCTTCTT
AGGTTACTTGAGATGGGGATTACAAAGCAAGATTTAACTCAAGCTGTTAATCTTGTGATCAATCAAAGATTAGTTACCAC
AAAGAGTTATGATCGACAACTTGTTTACGAAACGATGAGACATCCAGAAATACAATATTTTCTTACGCATAATTATCAAC
TCCCTAATGAATTTATAAGCTTAGTAGATAAGCTATCTTCATTAGAAAAAGAAGGCGTTATTGATGAAACAACTTTACGA
AAATATCAAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
59.752 |
99.691 |
0.596 |
| comGA | Staphylococcus aureus N315 |
59.752 |
99.691 |
0.596 |