Detailed information    

insolico Bioinformatically predicted

Overview


Name   med   Type   Regulator
Locus tag   BaDB11_RS18765 Genome accession   NZ_CP014795
Coordinates   3621098..3622051 (+) Length   317 a.a.
NCBI ID   WP_020450927.1    Uniprot ID   A0A6N2FML9
Organism   Bacillus licheniformis strain SCK B11     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context


Location: 3616098..3627051
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BaDB11_RS18735 (BaDB11_03760) argF 3616966..3617916 (+) 951 WP_020450924.1 ornithine carbamoyltransferase -
  BaDB11_RS18740 (BaDB11_03761) - 3617954..3618766 (-) 813 WP_020450925.1 undecaprenyl-diphosphate phosphatase -
  BaDB11_RS18745 (BaDB11_03762) - 3618948..3619127 (+) 180 WP_003180573.1 YjzC family protein -
  BaDB11_RS18750 (BaDB11_03763) - 3619191..3619385 (-) 195 WP_009328851.1 YjzD family protein -
  BaDB11_RS18755 (BaDB11_03764) - 3619617..3620351 (+) 735 WP_020450926.1 hypothetical protein -
  BaDB11_RS18760 (BaDB11_03765) - 3620438..3621013 (+) 576 WP_003180580.1 hypothetical protein -
  BaDB11_RS18765 (BaDB11_03766) med 3621098..3622051 (+) 954 WP_020450927.1 BMP family ABC transporter substrate-binding protein Regulator
  BaDB11_RS18770 (BaDB11_03767) comZ 3622062..3622247 (+) 186 WP_011197761.1 ComZ family protein Regulator
  BaDB11_RS18775 (BaDB11_03768) - 3622300..3622542 (-) 243 WP_020450928.1 hypothetical protein -
  BaDB11_RS18780 (BaDB11_03769) - 3622711..3623649 (+) 939 WP_003180588.1 beta-ketoacyl-ACP synthase III -
  BaDB11_RS18785 (BaDB11_03770) fabF 3623671..3624909 (+) 1239 WP_003180590.1 beta-ketoacyl-ACP synthase II -
  BaDB11_RS18790 (BaDB11_03771) - 3624997..3625785 (+) 789 WP_080618609.1 DUF2268 domain-containing protein -
  BaDB11_RS18795 (BaDB11_03772) - 3625977..3626951 (+) 975 WP_003180594.1 ABC transporter ATP-binding protein -

Sequence


Protein


Download         Length: 317 a.a.        Molecular weight: 35390.09 Da        Isoelectric Point: 4.7166

>NTDB_id=174345 BaDB11_RS18765 WP_020450927.1 3621098..3622051(+) (med) [Bacillus licheniformis strain SCK B11]
MVYRLVAIFFILLALSGCGQSPLKGKIEKVGLLVPDTINDQVWGTKGYKGLLRIQSVYNVDVYYKEGIDNDAAIKMAVED
FHKKGVNLIYGHGSEYEKAFNEICKDYPDIHFVLMNSKADHPNVTSISLEGEAMGFFGGMTAAHQSKTKKIGVLATYKWQ
PEVEGFSEGAKYLDPDIEVMTEYVGQWDDSENAVKLYEKMKKAGADVVYPAGDGYNVPVIEQIKKDGLYAIGYVSDQSEL
GENVVLTSTIQHVDDAYELTADEFNKGTLKGGKRSFDIQDGVIEMGEFSPVVDQSFQEKMNRLIDEYKKTNKLPNEH

Nucleotide


Download         Length: 954 bp        

>NTDB_id=174345 BaDB11_RS18765 WP_020450927.1 3621098..3622051(+) (med) [Bacillus licheniformis strain SCK B11]
ATGGTGTACAGGCTTGTCGCGATTTTTTTCATTCTCCTGGCGCTAAGCGGCTGCGGACAATCGCCGCTGAAAGGGAAAAT
TGAAAAAGTCGGTTTGCTTGTCCCTGATACGATAAATGACCAAGTATGGGGAACCAAAGGATATAAAGGATTATTAAGAA
TACAATCCGTCTACAATGTCGACGTCTATTATAAAGAGGGAATCGATAATGACGCTGCCATTAAAATGGCTGTAGAAGAT
TTTCACAAAAAAGGCGTCAACCTCATCTACGGGCACGGAAGCGAATATGAAAAAGCCTTTAATGAGATATGCAAAGATTA
TCCTGATATTCATTTTGTTTTAATGAACTCGAAAGCCGATCACCCAAATGTGACAAGCATATCGCTTGAAGGAGAAGCGA
TGGGGTTCTTCGGCGGAATGACGGCGGCCCATCAGTCAAAAACAAAGAAAATCGGCGTGCTCGCAACGTATAAATGGCAG
CCTGAAGTAGAAGGATTTTCCGAAGGGGCTAAATACCTCGATCCGGACATTGAGGTGATGACAGAATATGTCGGCCAGTG
GGACGACAGCGAAAATGCCGTCAAACTGTATGAAAAAATGAAGAAGGCAGGCGCGGATGTTGTGTATCCGGCCGGAGACG
GGTATAATGTCCCTGTCATTGAACAAATCAAAAAGGACGGGCTGTACGCTATCGGCTATGTAAGCGACCAGTCGGAATTG
GGTGAGAATGTCGTTTTGACAAGCACCATACAGCATGTAGACGACGCTTATGAACTCACCGCCGACGAGTTTAATAAAGG
AACGCTTAAAGGCGGCAAGCGCTCATTTGACATTCAAGACGGCGTCATCGAAATGGGAGAATTCAGCCCTGTTGTCGATC
AGTCATTTCAAGAAAAGATGAATCGGCTGATTGACGAATACAAAAAAACAAACAAACTGCCAAACGAACATTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A6N2FML9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

68.153

99.054

0.675


Multiple sequence alignment