Detailed information
Bioinformatically predicted
Overview
| Name | degS | Type | Regulator |
| Locus tag | BaDB11_RS09785 | Genome accession | NZ_CP014795 |
| Coordinates | 1800084..1801241 (-) | Length | 385 a.a. |
| NCBI ID | WP_003185733.1 | Uniprot ID | - |
| Organism | Bacillus licheniformis strain SCK B11 | ||
| Function | phosphorylation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1795084..1806241
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BaDB11_RS09755 (BaDB11_01968) | - | 1795326..1795745 (-) | 420 | WP_003185715.1 | TIGR03826 family flagellar region protein | - |
| BaDB11_RS09760 | comFC | 1795804..1796538 (-) | 735 | WP_059260889.1 | amidophosphoribosyltransferase | Machinery gene |
| BaDB11_RS09765 (BaDB11_01969) | - | 1796495..1796779 (-) | 285 | WP_003185718.1 | late competence development ComFB family protein | - |
| BaDB11_RS09770 (BaDB11_01970) | comFA | 1796834..1798228 (-) | 1395 | WP_059260886.1 | DEAD/DEAH box helicase | Machinery gene |
| BaDB11_RS09775 (BaDB11_01971) | - | 1798351..1799193 (-) | 843 | WP_003185726.1 | DegV family protein | - |
| BaDB11_RS09780 (BaDB11_01972) | degU | 1799313..1800002 (-) | 690 | WP_003185730.1 | two-component system response regulator DegU | Regulator |
| BaDB11_RS09785 (BaDB11_01973) | degS | 1800084..1801241 (-) | 1158 | WP_003185733.1 | sensor histidine kinase | Regulator |
| BaDB11_RS09790 (BaDB11_01974) | - | 1801455..1802093 (+) | 639 | WP_003185736.1 | YigZ family protein | - |
| BaDB11_RS09795 (BaDB11_01975) | - | 1802108..1803184 (+) | 1077 | WP_003185737.1 | LCP family protein | - |
| BaDB11_RS09800 (BaDB11_01976) | - | 1803269..1803643 (-) | 375 | WP_003185738.1 | YunG family protein | - |
| BaDB11_RS09805 (BaDB11_01977) | - | 1803763..1804827 (-) | 1065 | WP_003185739.1 | glycosyltransferase family 4 protein | - |
| BaDB11_RS09810 (BaDB11_01978) | tuaH | 1804958..1806139 (-) | 1182 | WP_059260879.1 | teichuronic acid biosynthesis protein TuaH | - |
Sequence
Protein
Download Length: 385 a.a. Molecular weight: 44636.36 Da Isoelectric Point: 6.7863
>NTDB_id=174319 BaDB11_RS09785 WP_003185733.1 1800084..1801241(-) (degS) [Bacillus licheniformis strain SCK B11]
MSVSKMDSKVLDSIIMKMLKTVDGSKDEVFQIGEQSRQQYEGLVEELKQIKQQVNEVIDLGDRLEVHARHARNRLSEVSR
NFHKFSEEEIREAYEKAHKLQVELTMIQQREKQLREKRDDLERRLLGLQEIIERSEGLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDKGTEEGFQEIKNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEDYHGKAKIHFQCIGESEERRIAPRFEVALFRLAQEAVTNALKHSESTEIHVKVEV
TKDFVTLIIKDNGNGFDLKEVKGKKNKSFGLLGMKERVDLLEGSMTIDSKIGLGTFILIKVPLSL
MSVSKMDSKVLDSIIMKMLKTVDGSKDEVFQIGEQSRQQYEGLVEELKQIKQQVNEVIDLGDRLEVHARHARNRLSEVSR
NFHKFSEEEIREAYEKAHKLQVELTMIQQREKQLREKRDDLERRLLGLQEIIERSEGLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDKGTEEGFQEIKNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEDYHGKAKIHFQCIGESEERRIAPRFEVALFRLAQEAVTNALKHSESTEIHVKVEV
TKDFVTLIIKDNGNGFDLKEVKGKKNKSFGLLGMKERVDLLEGSMTIDSKIGLGTFILIKVPLSL
Nucleotide
Download Length: 1158 bp
>NTDB_id=174319 BaDB11_RS09785 WP_003185733.1 1800084..1801241(-) (degS) [Bacillus licheniformis strain SCK B11]
GTGAGCGTTTCCAAAATGGACTCCAAAGTTTTAGATTCAATCATTATGAAGATGTTAAAAACGGTTGACGGGAGCAAGGA
TGAAGTCTTTCAAATCGGAGAGCAGTCCCGCCAGCAATACGAAGGCTTGGTAGAAGAGCTGAAACAGATTAAACAGCAGG
TCAACGAAGTCATCGATCTTGGAGACAGGCTGGAAGTGCATGCCCGCCATGCGCGGAACCGCTTGTCAGAGGTCAGCAGA
AACTTTCATAAATTCAGTGAAGAAGAGATTCGCGAAGCTTATGAAAAAGCCCACAAACTGCAGGTTGAACTGACAATGAT
CCAGCAGCGGGAAAAGCAGCTGAGAGAGAAGCGTGATGATCTGGAACGGCGCCTTTTGGGGCTTCAGGAAATCATCGAGC
GTTCAGAAGGGCTTGTCAGTCAGATTACCGTCGTCTTAAACTACTTAAATCAGGATCTGCGCCAGGTCGGCGTTCTCCTT
GAAGATGCGCAGGCCAAGCAGGATTTCGGACTGCGGATTATCGAAGCCCAGGAGGAAGAAAGAAAAAGGGTCTCAAGGGA
AATCCACGACGGTCCTGCGCAAATGCTGGCCAACGTTATGATGAGATCTGAACTGATCGAACGCATCTTCAGAGACAAAG
GAACAGAAGAAGGCTTTCAGGAAATTAAAAACCTCCGGCAAAACGTCAGAAATGCTCTTTATGAAGTCAGAAGAATCATT
TATGATTTAAGGCCGATGGCTTTAGACGATTTGGGATTGATACCGACGCTCAGAAAATACTTGAACACGATCGAAGATTA
TCATGGAAAAGCAAAGATTCATTTCCAATGCATCGGAGAATCCGAAGAAAGAAGAATAGCACCGCGGTTTGAGGTTGCAC
TATTCCGGCTTGCACAGGAAGCGGTGACAAACGCCTTAAAACACTCCGAATCAACTGAAATTCATGTTAAAGTAGAAGTG
ACAAAAGATTTTGTGACGCTGATTATCAAAGACAATGGAAACGGCTTTGACTTAAAAGAAGTAAAAGGCAAGAAGAACAA
ATCTTTCGGTCTGCTAGGTATGAAAGAAAGAGTCGATTTGCTCGAAGGCTCAATGACAATCGATTCGAAAATAGGTCTTG
GGACATTTATATTGATTAAAGTTCCACTGTCTTTGTAA
GTGAGCGTTTCCAAAATGGACTCCAAAGTTTTAGATTCAATCATTATGAAGATGTTAAAAACGGTTGACGGGAGCAAGGA
TGAAGTCTTTCAAATCGGAGAGCAGTCCCGCCAGCAATACGAAGGCTTGGTAGAAGAGCTGAAACAGATTAAACAGCAGG
TCAACGAAGTCATCGATCTTGGAGACAGGCTGGAAGTGCATGCCCGCCATGCGCGGAACCGCTTGTCAGAGGTCAGCAGA
AACTTTCATAAATTCAGTGAAGAAGAGATTCGCGAAGCTTATGAAAAAGCCCACAAACTGCAGGTTGAACTGACAATGAT
CCAGCAGCGGGAAAAGCAGCTGAGAGAGAAGCGTGATGATCTGGAACGGCGCCTTTTGGGGCTTCAGGAAATCATCGAGC
GTTCAGAAGGGCTTGTCAGTCAGATTACCGTCGTCTTAAACTACTTAAATCAGGATCTGCGCCAGGTCGGCGTTCTCCTT
GAAGATGCGCAGGCCAAGCAGGATTTCGGACTGCGGATTATCGAAGCCCAGGAGGAAGAAAGAAAAAGGGTCTCAAGGGA
AATCCACGACGGTCCTGCGCAAATGCTGGCCAACGTTATGATGAGATCTGAACTGATCGAACGCATCTTCAGAGACAAAG
GAACAGAAGAAGGCTTTCAGGAAATTAAAAACCTCCGGCAAAACGTCAGAAATGCTCTTTATGAAGTCAGAAGAATCATT
TATGATTTAAGGCCGATGGCTTTAGACGATTTGGGATTGATACCGACGCTCAGAAAATACTTGAACACGATCGAAGATTA
TCATGGAAAAGCAAAGATTCATTTCCAATGCATCGGAGAATCCGAAGAAAGAAGAATAGCACCGCGGTTTGAGGTTGCAC
TATTCCGGCTTGCACAGGAAGCGGTGACAAACGCCTTAAAACACTCCGAATCAACTGAAATTCATGTTAAAGTAGAAGTG
ACAAAAGATTTTGTGACGCTGATTATCAAAGACAATGGAAACGGCTTTGACTTAAAAGAAGTAAAAGGCAAGAAGAACAA
ATCTTTCGGTCTGCTAGGTATGAAAGAAAGAGTCGATTTGCTCGAAGGCTCAATGACAATCGATTCGAAAATAGGTCTTG
GGACATTTATATTGATTAAAGTTCCACTGTCTTTGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| degS | Bacillus subtilis subsp. subtilis str. 168 |
89.351 |
100 |
0.894 |