Detailed information
Bioinformatically predicted
Overview
| Name | radC | Type | Machinery gene |
| Locus tag | BFL24_RS07525 | Genome accession | NZ_CP018241 |
| Coordinates | 1448291..1448767 (+) | Length | 158 a.a. |
| NCBI ID | WP_001186738.1 | Uniprot ID | B7UP40 |
| Organism | Escherichia coli strain 319 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 1443291..1453767
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BFL24_RS07495 (BFL24_07435) | - | 1444569..1445474 (+) | 906 | WP_000203541.1 | diguanylate cyclase regulator RdcB family protein | - |
| BFL24_RS07500 (BFL24_07440) | - | 1445471..1446541 (+) | 1071 | WP_000102669.1 | patatin-like phospholipase family protein | - |
| BFL24_RS07515 (BFL24_07455) | - | 1446881..1447699 (+) | 819 | WP_001234682.1 | DUF932 domain-containing protein | - |
| BFL24_RS07520 (BFL24_07460) | - | 1447790..1448275 (+) | 486 | WP_000214398.1 | antirestriction protein | - |
| BFL24_RS07525 (BFL24_07465) | radC | 1448291..1448767 (+) | 477 | WP_001186738.1 | RadC family protein | Machinery gene |
| BFL24_RS07530 (BFL24_07470) | - | 1448830..1449051 (+) | 222 | WP_001220314.1 | DUF987 domain-containing protein | - |
| BFL24_RS07540 (BFL24_07480) | - | 1449214..1449588 (+) | 375 | WP_001280954.1 | type IV toxin-antitoxin system YeeU family antitoxin | - |
| BFL24_RS07545 (BFL24_07485) | - | 1449635..1450009 (+) | 375 | WP_000854914.1 | TA system toxin CbtA family protein | - |
| BFL24_RS07550 (BFL24_07490) | - | 1450006..1450497 (+) | 492 | WP_000976858.1 | DUF5983 family protein | - |
| BFL24_RS07555 (BFL24_07495) | - | 1450509..1450706 (+) | 198 | WP_000839282.1 | DUF957 domain-containing protein | - |
| BFL24_RS07560 (BFL24_07500) | - | 1450791..1451633 (+) | 843 | WP_072640337.1 | DUF4942 domain-containing protein | - |
| BFL24_RS07570 (BFL24_07510) | ghrA | 1452104..1453042 (+) | 939 | WP_000351284.1 | glyoxylate/hydroxypyruvate reductase GhrA | - |
Sequence
Protein
Download Length: 158 a.a. Molecular weight: 17673.28 Da Isoelectric Point: 6.9242
>NTDB_id=174294 BFL24_RS07525 WP_001186738.1 1448291..1448767(+) (radC) [Escherichia coli strain 319]
MQQLSFLPGEMTPGERSLILRALQTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGT
INRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL
MQQLSFLPGEMTPGERSLILRALQTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGT
INRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL
Nucleotide
Download Length: 477 bp
>NTDB_id=174294 BFL24_RS07525 WP_001186738.1 1448291..1448767(+) (radC) [Escherichia coli strain 319]
ATGCAGCAGCTTTCCTTTCTGCCCGGAGAGATGACGCCCGGCGAGCGCAGTCTCATTCTGCGGGCCCTGCAAACCCTGGA
CCGCCATCTTCATGAACCCGGCGTGGCCTTCACCTCCACCCGTGCGGCACGGGAATGGCTGATTCTGAACATGGCGGGAC
TGGAGCGGGAAGAGTTCCGGGTGCTGTATCTGAACAACCAGAATCAGCTGATTGCCGGTGAAACCCTCTTCACCGGCACC
ATCAACCGTACGGAAGTTCATCCCCGGGAAGTGATTAAACGCGCCCTGTACCACAATGCCGCTGCCGTGGTGCTGGCGCA
CAATCACCCGTCCGGTGAAGTCACACCCAGTAAGGCAGACCGGCTTATCACCGAACGTCTGGTACAGGCACTGGGCCTGG
TGGATATCCGGGTGCCGGACCATCTGATAGTCGGTGGCAACCAGGTTTTCTCCTTTGCCGAACATGGTCTGCTTTAA
ATGCAGCAGCTTTCCTTTCTGCCCGGAGAGATGACGCCCGGCGAGCGCAGTCTCATTCTGCGGGCCCTGCAAACCCTGGA
CCGCCATCTTCATGAACCCGGCGTGGCCTTCACCTCCACCCGTGCGGCACGGGAATGGCTGATTCTGAACATGGCGGGAC
TGGAGCGGGAAGAGTTCCGGGTGCTGTATCTGAACAACCAGAATCAGCTGATTGCCGGTGAAACCCTCTTCACCGGCACC
ATCAACCGTACGGAAGTTCATCCCCGGGAAGTGATTAAACGCGCCCTGTACCACAATGCCGCTGCCGTGGTGCTGGCGCA
CAATCACCCGTCCGGTGAAGTCACACCCAGTAAGGCAGACCGGCTTATCACCGAACGTCTGGTACAGGCACTGGGCCTGG
TGGATATCCGGGTGCCGGACCATCTGATAGTCGGTGGCAACCAGGTTTTCTCCTTTGCCGAACATGGTCTGCTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| radC | Haemophilus influenzae Rd KW20 |
54.867 |
71.519 |
0.392 |