Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | B37_RS19850 | Genome accession | NZ_CP014794 |
| Coordinates | 3808730..3809020 (-) | Length | 96 a.a. |
| NCBI ID | WP_085959887.1 | Uniprot ID | - |
| Organism | Bacillus licheniformis strain SCCB 37 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3803730..3814020
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B37_RS19810 (B37_04001) | - | 3803754..3804083 (+) | 330 | WP_003178156.1 | cyclic-di-AMP receptor | - |
| B37_RS19815 (B37_04002) | - | 3804095..3804535 (+) | 441 | WP_003178158.1 | YaaR family protein | - |
| B37_RS19820 (B37_04003) | holB | 3804547..3805536 (+) | 990 | WP_003178160.1 | DNA polymerase III subunit delta' | - |
| B37_RS19825 (B37_04004) | - | 3805539..3806366 (+) | 828 | WP_003178162.1 | PSP1 domain-containing protein | - |
| B37_RS19830 (B37_04005) | yabA | 3806381..3806743 (+) | 363 | WP_003178164.1 | DNA replication initiation control protein YabA | - |
| B37_RS19835 (B37_04006) | - | 3806808..3807551 (+) | 744 | WP_003178166.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| B37_RS19840 (B37_04007) | - | 3807538..3807831 (+) | 294 | WP_003178169.1 | GIY-YIG nuclease family protein | - |
| B37_RS19845 (B37_04008) | rsmI | 3807806..3808681 (+) | 876 | WP_025805862.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| B37_RS19850 (B37_04009) | abrB | 3808730..3809020 (-) | 291 | WP_085959887.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Regulator |
| B37_RS19855 (B37_04010) | metG | 3809528..3811516 (+) | 1989 | WP_025805864.1 | methionine--tRNA ligase | - |
| B37_RS19860 (B37_04011) | - | 3811601..3812368 (+) | 768 | WP_017474310.1 | TatD family hydrolase | - |
| B37_RS19865 (B37_04012) | - | 3812485..3813810 (+) | 1326 | WP_003178178.1 | G5 and 3D domain-containing protein | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10680.43 Da Isoelectric Point: 5.1848
>NTDB_id=174281 B37_RS19850 WP_085959887.1 3808730..3809020(-) (abrB) [Bacillus licheniformis strain SCCB 37]
MNMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSPEG
AEQIINEIQAQLQSQK
MNMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSPEG
AEQIINEIQAQLQSQK
Nucleotide
Download Length: 291 bp
>NTDB_id=174281 B37_RS19850 WP_085959887.1 3808730..3809020(-) (abrB) [Bacillus licheniformis strain SCCB 37]
ATGAATATGAAATCTACAGGTATTGTACGTAAAGTTGATGAACTAGGACGCGTGGTGATTCCAATCGAACTTCGCCGTAC
GCTTGGAATCGCAGAAAAAGACGCTCTTGAAATCTATGTAGATGACGAAAAAATCATCTTGAAAAAATATAAACCAAACA
TGACTTGCCAAGTTACAGGTGAGGTTTCTGATGACAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGCCCTGAAGGC
GCTGAGCAAATCATTAACGAAATTCAAGCACAACTTCAATCTCAAAAATAA
ATGAATATGAAATCTACAGGTATTGTACGTAAAGTTGATGAACTAGGACGCGTGGTGATTCCAATCGAACTTCGCCGTAC
GCTTGGAATCGCAGAAAAAGACGCTCTTGAAATCTATGTAGATGACGAAAAAATCATCTTGAAAAAATATAAACCAAACA
TGACTTGCCAAGTTACAGGTGAGGTTTCTGATGACAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGCCCTGAAGGC
GCTGAGCAAATCATTAACGAAATTCAAGCACAACTTCAATCTCAAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
93.75 |
100 |
0.938 |