Detailed information
Bioinformatically predicted
Overview
| Name | comK | Type | Regulator |
| Locus tag | B34_RS20920 | Genome accession | NZ_CP014793 |
| Coordinates | 4005077..4005655 (+) | Length | 192 a.a. |
| NCBI ID | WP_003180354.1 | Uniprot ID | A0A1Y0YMJ8 |
| Organism | Bacillus licheniformis strain SCDB 34 | ||
| Function | activate transcription of late competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 4000077..4010655
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B34_RS24585 | - | 4000579..4001085 (-) | 507 | WP_370539003.1 | methyl-accepting chemotaxis protein | - |
| B34_RS24590 | - | 4001386..4001757 (-) | 372 | Protein_4096 | protoglobin family protein | - |
| B34_RS20905 (B34_04223) | - | 4001978..4003528 (-) | 1551 | WP_044051823.1 | FAD-dependent oxidoreductase | - |
| B34_RS20910 (B34_04224) | - | 4003648..4004505 (+) | 858 | WP_003180352.1 | SDR family oxidoreductase | - |
| B34_RS20915 (B34_04225) | - | 4004571..4004804 (-) | 234 | WP_003180353.1 | IDEAL domain-containing protein | - |
| B34_RS20920 (B34_04226) | comK | 4005077..4005655 (+) | 579 | WP_003180354.1 | competence protein ComK | Regulator |
| B34_RS20925 (B34_04227) | - | 4005649..4006014 (-) | 366 | WP_003180357.1 | hypothetical protein | - |
| B34_RS20930 (B34_04228) | - | 4006223..4006834 (+) | 612 | WP_003180359.1 | TVP38/TMEM64 family protein | - |
| B34_RS20935 (B34_04229) | lepB | 4006847..4007365 (+) | 519 | WP_003180360.1 | signal peptidase I | - |
| B34_RS20940 (B34_04230) | - | 4007520..4009295 (-) | 1776 | WP_003180361.1 | S8 family peptidase | - |
Sequence
Protein
Download Length: 192 a.a. Molecular weight: 22432.65 Da Isoelectric Point: 8.6274
>NTDB_id=174202 B34_RS20920 WP_003180354.1 4005077..4005655(+) (comK) [Bacillus licheniformis strain SCDB 34]
MSTEDMTKDTYEVNSSTMAVLPLGEGEKPASKILETDRTFRVNMKPFQIIERSCRYFGSSYAGRKAGTYEVIKVSHKPPI
MVDHSNNIFLFPTFSSTRPQCGWLSHAHVHEFCAAKYDNTFVTFVNGETLELPVSISSFENQVYRTAWLRTKFIDRIEGN
PMQKKQEFMLYPKEDRNQLIYEFILRELKKRY
MSTEDMTKDTYEVNSSTMAVLPLGEGEKPASKILETDRTFRVNMKPFQIIERSCRYFGSSYAGRKAGTYEVIKVSHKPPI
MVDHSNNIFLFPTFSSTRPQCGWLSHAHVHEFCAAKYDNTFVTFVNGETLELPVSISSFENQVYRTAWLRTKFIDRIEGN
PMQKKQEFMLYPKEDRNQLIYEFILRELKKRY
Nucleotide
Download Length: 579 bp
>NTDB_id=174202 B34_RS20920 WP_003180354.1 4005077..4005655(+) (comK) [Bacillus licheniformis strain SCDB 34]
ATGAGCACAGAGGATATGACAAAGGATACGTATGAAGTAAACAGTTCGACAATGGCTGTCCTGCCTCTGGGAGAGGGGGA
GAAACCCGCCTCAAAAATACTTGAGACCGACAGGACTTTCCGCGTCAATATGAAGCCGTTTCAAATTATCGAAAGAAGCT
GCCGCTATTTCGGATCGAGCTATGCGGGAAGAAAAGCGGGCACATATGAAGTCATTAAAGTTTCCCATAAACCGCCGATC
ATGGTGGATCACTCAAACAACATTTTTCTTTTCCCCACATTTTCCTCAACTCGTCCTCAGTGCGGGTGGCTTTCCCATGC
GCATGTTCACGAGTTTTGCGCGGCAAAGTATGACAACACGTTTGTCACGTTTGTCAACGGGGAAACGCTGGAGCTGCCCG
TATCCATCTCATCTTTCGAAAACCAGGTTTACCGAACGGCATGGCTGAGAACAAAATTTATCGACAGGATTGAAGGAAAC
CCCATGCAGAAGAAACAGGAATTTATGCTCTATCCGAAAGAAGACCGGAATCAGCTGATATACGAATTCATCCTCAGGGA
GCTGAAAAAGCGCTATTGA
ATGAGCACAGAGGATATGACAAAGGATACGTATGAAGTAAACAGTTCGACAATGGCTGTCCTGCCTCTGGGAGAGGGGGA
GAAACCCGCCTCAAAAATACTTGAGACCGACAGGACTTTCCGCGTCAATATGAAGCCGTTTCAAATTATCGAAAGAAGCT
GCCGCTATTTCGGATCGAGCTATGCGGGAAGAAAAGCGGGCACATATGAAGTCATTAAAGTTTCCCATAAACCGCCGATC
ATGGTGGATCACTCAAACAACATTTTTCTTTTCCCCACATTTTCCTCAACTCGTCCTCAGTGCGGGTGGCTTTCCCATGC
GCATGTTCACGAGTTTTGCGCGGCAAAGTATGACAACACGTTTGTCACGTTTGTCAACGGGGAAACGCTGGAGCTGCCCG
TATCCATCTCATCTTTCGAAAACCAGGTTTACCGAACGGCATGGCTGAGAACAAAATTTATCGACAGGATTGAAGGAAAC
CCCATGCAGAAGAAACAGGAATTTATGCTCTATCCGAAAGAAGACCGGAATCAGCTGATATACGAATTCATCCTCAGGGA
GCTGAAAAAGCGCTATTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comK | Bacillus subtilis subsp. subtilis str. 168 |
68.617 |
97.917 |
0.672 |