Detailed information NTG0173998

Bioinformatically predicted

Overview

• Name: irvR
• Type: Regulator
• Locus tag: BSR30_RS07620
• Genome accession: NZ_CP018205
• Coordinates: 1502772..1503485 (+)
• Length: 237 a.a.
• NCBI ID: WP_001031454.1
• Uniprot ID: A0A0H2XG68
• Organism: Staphylococcus aureus strain HG001 isolate RN1
• Function: regulate expression of competence genes (predicted from homology) Competence regulation

Genomic Context

Location: 1497772..1508485

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BSR30_RS07565	-	1498524..1499081 (-)	558	WP_000645042.1	DUF2815 family protein	-
BSR30_RS07570	-	1499107..1500273 (-)	1167	WP_000762540.1	DUF2800 domain-containing protein	-
BSR30_RS07575	-	1500270..1500632 (-)	363	WP_000279452.1	hypothetical protein	-
BSR30_RS07580	-	1500647..1500970 (-)	324	WP_000174996.1	hypothetical protein	-
BSR30_RS07585	-	1501049..1501210 (-)	162	WP_001285961.1	DUF1270 domain-containing protein	-
BSR30_RS07590	-	1501223..1501486 (-)	264	WP_001124160.1	helix-turn-helix domain-containing protein	-
BSR30_RS07595	-	1501511..1501726 (-)	216	WP_001097552.1	hypothetical protein	-
BSR30_RS07600	-	1501781..1502146 (+)	366	WP_001131647.1	hypothetical protein	-
BSR30_RS07605	-	1502115..1502360 (-)	246	WP_001025402.1	DUF2829 domain-containing protein	-
BSR30_RS07610	-	1502376..1502639 (-)	264	WP_000854072.1	helix-turn-helix transcriptional regulator	-
BSR30_RS07615	-	1502636..1502809 (-)	174	WP_001801500.1	hypothetical protein	-
BSR30_RS07620	irvR	1502772..1503485 (+)	714	WP_001031454.1	XRE family transcriptional regulator	Regulator
BSR30_RS07625	-	1503501..1504433 (+)	933	WP_000759682.1	exonuclease domain-containing protein	-
BSR30_RS07630	-	1504439..1504780 (+)	342	WP_000591749.1	hypothetical protein	-
BSR30_RS07635	-	1504984..1505166 (+)	183	WP_000705240.1	hypothetical protein	-
BSR30_RS07640	-	1505203..1505349 (+)	147	WP_001013104.1	hypothetical protein	-
BSR30_RS07645	-	1505346..1505960 (-)	615	WP_000191459.1	hypothetical protein	-
BSR30_RS07650	-	1506086..1507291 (+)	1206	WP_000264748.1	tyrosine-type recombinase/integrase	-

Sequence

Protein

• Length: 237 a.a.
• Molecular weight: 27017.58 Da
• Isoelectric Point: 5.0545

>NTDB_id=173998 BSR30_RS07620 WP_001031454.1 1502772..1503485(+) (irvR) [Staphylococcus aureus strain HG001 isolate RN1]
MNKERNIIIAKNIRKFLNDSNMSQKKLAELINIKPSTLSDYLNLRSNPSHGVIQRIADVFEVGKSDIDTTYKDDNDITSI
YNKLTPPRQENVLNYANEQLEEQNSKGDNVVDINSYKQEKTPVNVNGCVSAGVGERLHDETLFTEMVKGPIPTHDLALKV
NGDSMEPMFKDGEIIFVEKTHNIKNGQIGIFIIEEEAYVKKVFVEDDRLTLVSLNKDYDDLHFYRNESVRLIGKVIL

Nucleotide

• Length: 714 bp

>NTDB_id=173998 BSR30_RS07620 WP_001031454.1 1502772..1503485(+) (irvR) [Staphylococcus aureus strain HG001 isolate RN1]
ATGAACAAAGAAAGAAATATTATTATAGCCAAAAACATTAGAAAATTTCTCAACGATTCAAATATGTCTCAAAAGAAACT
TGCTGAACTCATTAACATAAAACCATCTACTTTAAGCGATTATTTAAATTTACGTTCCAACCCCTCTCACGGCGTTATAC
AAAGGATAGCTGATGTTTTCGAGGTTGGTAAAAGCGACATAGATACTACATACAAAGACGATAACGACATCACTTCCATA
TACAACAAACTCACACCTCCCCGCCAAGAAAACGTACTTAACTATGCAAATGAACAATTGGAAGAACAGAATTCTAAAGG
AGATAACGTTGTAGATATTAATTCATATAAACAGGAGAAAACTCCAGTTAACGTCAATGGTTGCGTCTCTGCTGGTGTAG
GAGAACGTTTACACGATGAAACGCTATTTACTGAAATGGTTAAAGGACCTATCCCCACACACGATTTAGCGTTAAAAGTA
AATGGTGATTCTATGGAACCTATGTTTAAAGATGGCGAAATCATATTTGTGGAGAAAACTCACAATATAAAGAATGGACA
AATTGGTATATTCATCATTGAAGAAGAAGCGTACGTTAAGAAAGTCTTTGTTGAAGATGATAGATTGACTCTAGTTTCAC
TAAATAAAGATTACGACGATCTACACTTTTATAGAAATGAAAGTGTGAGGTTAATTGGAAAAGTTATTTTATAA

Domains

Predicted by InterProScan.

• Peptidase S24-like (Peptidase_S24) (127-236)

• Helix-turn-helix (HTH_3) (13-63)

3D structure

• AlphaFold DB: A0A0H2XG68

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
irvR	Streptococcus mutans UA159	33.929	100	0.401