Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   A1R12_RS05620 Genome accession   NZ_CP014783
Coordinates   1108223..1108879 (+) Length   218 a.a.
NCBI ID   WP_003155032.1    Uniprot ID   I2C3J8
Organism   Bacillus amyloliquefaciens strain B15     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1103223..1113879
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A1R12_RS05595 (A1R12_05595) oppF 1103753..1104670 (+) 918 WP_017417453.1 oligopeptide ABC transporter ATP-binding protein OppF -
  A1R12_RS05600 (A1R12_05600) - 1104777..1105964 (+) 1188 WP_061890536.1 putative glycoside hydrolase -
  A1R12_RS05605 (A1R12_05605) - 1106082..1106660 (+) 579 WP_061890537.1 GNAT family N-acetyltransferase -
  A1R12_RS05610 (A1R12_05610) spx 1106838..1107233 (+) 396 WP_003155034.1 transcriptional regulator Spx -
  A1R12_RS05615 (A1R12_05615) - 1107291..1107947 (-) 657 WP_007409109.1 TerC family protein -
  A1R12_RS05620 (A1R12_05620) mecA 1108223..1108879 (+) 657 WP_003155032.1 adaptor protein MecA Regulator
  A1R12_RS05625 (A1R12_05625) - 1109030..1110217 (+) 1188 WP_015417214.1 competence protein CoiA family protein -
  A1R12_RS05630 (A1R12_05630) pepF 1110420..1112249 (+) 1830 WP_007409107.1 oligoendopeptidase F Regulator
  A1R12_RS20230 - 1112287..1112454 (-) 168 WP_003155026.1 hypothetical protein -
  A1R12_RS05635 (A1R12_05635) spxH 1112740..1113642 (-) 903 WP_039251990.1 protease adaptor protein SpxH -

Sequence

Protein


Download         Length: 218 a.a.        Molecular weight: 25964.75 Da        Isoelectric Point: 4.1143

>NTDB_id=173960 A1R12_RS05620 WP_003155032.1 1108223..1108879(+) (mecA) [Bacillus amyloliquefaciens strain B15]
MEIERINEHTVKFYMSYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHDEEEFAVEGPLWIQVQALDKGLEIIVTKAQL
SKDGQKLELPIPEDKKQEPADENLDALLDDFQKEEQAESREDKEQKLQFTLRFDDFEDLISLSKLNLNGIKTTLYSFEDR
YYLYADFYEQTDEEVENQLSILLEYAHESSVSIHRLEEYGKLVIADHALYTIKKHFAS

Nucleotide


Download         Length: 657 bp        

>NTDB_id=173960 A1R12_RS05620 WP_003155032.1 1108223..1108879(+) (mecA) [Bacillus amyloliquefaciens strain B15]
ATGGAAATAGAAAGAATTAATGAGCATACTGTAAAATTTTATATGTCTTATGGTGATATTGAAGATCGCGGTTTTGACAG
AGAAGAAATCTGGTACAATCGCGAGCGCAGTGAAGAACTGTTCTGGGAAGTCATGGATGAAGTGCATGATGAAGAGGAAT
TCGCTGTCGAGGGTCCTCTTTGGATTCAGGTTCAGGCATTGGACAAAGGACTGGAAATAATCGTAACAAAAGCCCAGCTT
TCCAAGGACGGACAAAAACTCGAACTGCCGATCCCGGAAGATAAAAAACAAGAGCCGGCAGATGAAAATCTCGATGCTTT
ACTTGATGATTTCCAGAAAGAAGAGCAGGCCGAGAGCCGGGAAGATAAGGAGCAAAAGCTTCAGTTCACTTTGCGGTTCG
ATGATTTTGAGGATCTCATCTCGCTATCAAAATTGAATCTTAACGGAATCAAAACGACCCTGTATTCGTTTGAAGACCGA
TATTATTTATATGCAGATTTTTATGAGCAAACTGATGAAGAGGTTGAAAATCAGCTAAGCATCCTGTTGGAGTACGCGCA
CGAATCATCAGTCAGCATTCACCGTCTTGAAGAATACGGCAAATTGGTGATCGCTGATCATGCGTTATATACAATAAAAA
AACACTTTGCATCATAA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I2C3J8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

89.45

100

0.895

Multiple sequence alignment