Detailed information NTG0173901

Bioinformatically predicted

Overview

• Name: comFC
• Type: Machinery gene
• Locus tag: AB684_RS18910
• Genome accession: NZ_CP014781
• Coordinates: 3661136..3661870 (-)
• Length: 244 a.a.
• NCBI ID: WP_011198352.1
• Uniprot ID: A0A415J866
• Organism: Bacillus licheniformis strain HRBL-15TDI7
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3656136..3666870

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB684_RS18875 (AB684_18875)	fliW	3656287..3656718 (-)	432	WP_011198351.1	flagellar assembly protein FliW	-
AB684_RS18880 (AB684_18880)	-	3656740..3657306 (-)	567	WP_003185702.1	DUF6470 family protein	-
AB684_RS18885 (AB684_18885)	flgL	3657356..3658267 (-)	912	WP_003185705.1	flagellar hook-associated protein FlgL	-
AB684_RS18890 (AB684_18890)	flgK	3658278..3659801 (-)	1524	WP_003185709.1	flagellar hook-associated protein FlgK	-
AB684_RS18895 (AB684_18895)	-	3659817..3660293 (-)	477	WP_003185711.1	flagellar protein FlgN	-
AB684_RS18900 (AB684_18900)	flgM	3660312..3660578 (-)	267	WP_003185713.1	flagellar biosynthesis anti-sigma factor FlgM	-
AB684_RS18905 (AB684_18905)	-	3660658..3661077 (-)	420	WP_003185715.1	TIGR03826 family flagellar region protein	-
AB684_RS18910 (AB684_18910)	comFC	3661136..3661870 (-)	735	WP_011198352.1	amidophosphoribosyltransferase	Machinery gene
AB684_RS18915 (AB684_18915)	-	3661827..3662111 (-)	285	WP_003185718.1	late competence development ComFB family protein	-
AB684_RS18920 (AB684_18920)	comFA	3662166..3663560 (-)	1395	WP_003185720.1	DEAD/DEAH box helicase	Machinery gene
AB684_RS18925 (AB684_18925)	-	3663681..3664523 (-)	843	WP_003185726.1	DegV family protein	-
AB684_RS18930 (AB684_18930)	degU	3664643..3665332 (-)	690	WP_003185730.1	two-component system response regulator DegU	Regulator
AB684_RS18935 (AB684_18935)	degS	3665414..3666571 (-)	1158	WP_003185733.1	sensor histidine kinase	Regulator

Sequence

Protein

• Length: 244 a.a.
• Molecular weight: 27811.22 Da
• Isoelectric Point: 9.4827

>NTDB_id=173901 AB684_RS18910 WP_011198352.1 3661136..3661870(-) (comFC) [Bacillus licheniformis strain HRBL-15TDI7]
MKTRFAQAIEEGGNKLNCLICAAPLLHSLSWHSFFFLRSEEKICRECKENFIEIKGTVCPKCGRPQGSEELCGDCAKWEA
NPLTRSLLRQNRSVYLYNTFMKEVLARFKFRGDAELVFAFAPSFISAFQQYFRRSPSVLVPIPLSEERKAERGFNQAERL
ASLLQIPVIHPLIRIENEKQSKKSRKERIKPKTVFRTEKGSVKNLDVILIDDLYTTGATLHHAADCLMTSGEAKSVSSYT
LIRS

Nucleotide

• Length: 735 bp

>NTDB_id=173901 AB684_RS18910 WP_011198352.1 3661136..3661870(-) (comFC) [Bacillus licheniformis strain HRBL-15TDI7]
ATGAAAACCCGCTTTGCGCAAGCAATCGAAGAGGGAGGGAATAAACTGAATTGTTTAATTTGTGCAGCGCCTCTTTTACA
TTCTCTCTCATGGCATTCTTTTTTCTTTTTACGATCAGAAGAGAAAATATGCAGGGAATGTAAAGAGAACTTTATCGAGA
TCAAAGGAACCGTATGCCCTAAGTGCGGACGGCCACAGGGGAGCGAAGAGCTGTGCGGTGACTGCGCAAAATGGGAGGCC
AATCCGTTAACCCGCTCTCTTTTGAGGCAAAACCGCTCTGTTTATCTCTACAATACTTTCATGAAAGAAGTCCTTGCCCG
TTTTAAGTTCAGAGGTGATGCTGAACTGGTCTTCGCTTTTGCCCCTTCATTTATCAGCGCTTTTCAACAATACTTCCGCC
GCAGCCCGTCTGTTTTAGTTCCGATACCTCTCAGTGAAGAACGTAAAGCGGAGAGGGGATTTAATCAGGCGGAGCGTCTT
GCTTCCTTATTACAAATACCCGTTATTCATCCCTTGATCAGAATCGAAAATGAAAAACAATCCAAAAAAAGCAGGAAAGA
GCGAATTAAGCCAAAAACCGTTTTTAGAACCGAAAAGGGGTCAGTAAAGAATCTGGATGTCATATTGATTGACGACTTGT
ATACGACAGGAGCGACCCTTCATCATGCCGCTGATTGCCTGATGACATCCGGAGAAGCAAAATCTGTATCATCATATACA
TTAATTAGAAGCTAA

Domains

Predicted by InterproScan.

• Phosphoribosyl transferase domain (Pribosyltran) (151-242)

• Double zinc ribbon domain (DZR_2) (17-76)

3D structure

• AlphaFold DB: A0A415J866

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC	Bacillus subtilis subsp. subtilis str. 168	52.321	97.131	0.508