Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   BSO20_RS11990 Genome accession   NZ_CP018200
Coordinates   2486047..2486898 (+) Length   283 a.a.
NCBI ID   WP_032875307.1    Uniprot ID   -
Organism   Bacillus amyloliquefaciens strain WS-8     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2481047..2491898
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BSO20_RS11970 (BSO20_11980) mnmG 2481402..2483288 (+) 1887 WP_007615086.1 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG -
  BSO20_RS11975 (BSO20_11985) rsmG 2483302..2484021 (+) 720 WP_007409901.1 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG -
  BSO20_RS11980 (BSO20_11990) noc 2484143..2484994 (+) 852 WP_007615083.1 nucleoid occlusion protein -
  BSO20_RS11985 (BSO20_11995) soj 2485293..2486054 (+) 762 WP_007409899.1 sporulation initiation inhibitor protein Soj -
  BSO20_RS11990 (BSO20_12000) spo0J 2486047..2486898 (+) 852 WP_032875307.1 ParB/RepB/Spo0J family partition protein Regulator
  BSO20_RS11995 (BSO20_12005) yyaC 2486928..2487542 (-) 615 WP_032875310.1 spore protease YyaC -
  BSO20_RS12000 (BSO20_12010) - 2487717..2488220 (-) 504 WP_032875313.1 GNAT family N-acetyltransferase -
  BSO20_RS12005 (BSO20_12015) - 2488364..2489389 (+) 1026 WP_087920784.1 hypothetical protein -
  BSO20_RS12010 (BSO20_12020) - 2489475..2489681 (+) 207 WP_004392973.1 DUF951 domain-containing protein -
  BSO20_RS12015 (BSO20_12025) - 2489728..2491731 (+) 2004 WP_032875323.1 molybdopterin-dependent oxidoreductase -

Sequence

Protein


Download         Length: 283 a.a.        Molecular weight: 32324.26 Da        Isoelectric Point: 8.3471

>NTDB_id=173899 BSO20_RS11990 WP_032875307.1 2486047..2486898(+) (spo0J) [Bacillus amyloliquefaciens strain WS-8]
MAKGGLGKGINALFNQVDLSEETVEEIKISDLRPNPYQPRKQFDDESLAELKESIIQHGILQPIIVRKSLKGYDIVAGER
RYRAAKLAGKETVPAIVRDLSESLMREIALLENLQREDLSPLEEALAYDSLLKHLDLTQEQLAKRLGKSRPHIANHLRLL
TLPESIQNLIAEGTLSMGHGRTLLGLKNKNKLEPLVKKVVEEQLNVRQLEQLIQQLNSNVPRETKKKEPVQDVVLKERES
YLQNYFGTTVNIKRQKKKGKIEIEFFSNEDLERILELLSEREA

Nucleotide


Download         Length: 852 bp        

>NTDB_id=173899 BSO20_RS11990 WP_032875307.1 2486047..2486898(+) (spo0J) [Bacillus amyloliquefaciens strain WS-8]
ATGGCTAAAGGCGGGCTCGGAAAAGGGATTAACGCGTTGTTTAATCAGGTTGATTTGTCTGAAGAGACAGTGGAAGAGAT
TAAAATCAGTGATTTACGTCCCAATCCTTATCAGCCAAGAAAACAATTTGACGATGAGTCATTAGCTGAACTGAAGGAAT
CCATCATTCAGCATGGCATTCTTCAGCCCATTATCGTGAGAAAATCATTAAAGGGCTATGATATTGTAGCCGGCGAACGC
CGTTACCGCGCCGCAAAACTTGCCGGTAAAGAGACAGTGCCGGCTATCGTGCGGGATTTATCTGAATCGCTGATGCGGGA
AATCGCTCTTTTGGAAAACCTTCAGCGTGAAGACTTATCACCGCTTGAAGAAGCTCTGGCATATGACTCACTGCTGAAAC
ATTTGGATTTAACCCAGGAACAGCTCGCTAAACGGCTTGGGAAAAGCAGGCCTCATATTGCCAACCATTTAAGACTGCTG
ACGCTGCCGGAAAGCATCCAGAACCTCATTGCAGAAGGTACGTTATCCATGGGACACGGCAGAACCTTGCTTGGTTTGAA
AAATAAAAACAAGCTTGAACCGCTTGTGAAGAAAGTGGTTGAAGAACAGCTGAACGTCCGTCAGCTTGAGCAGCTGATTC
AGCAGTTAAACAGCAATGTTCCACGTGAAACAAAGAAAAAAGAACCTGTTCAAGATGTTGTGTTAAAAGAGCGGGAATCG
TATTTGCAAAATTACTTCGGAACAACAGTAAATATTAAGAGACAAAAGAAAAAAGGGAAGATTGAGATTGAGTTTTTCTC
AAATGAAGATCTTGAACGTATCCTGGAACTATTGTCTGAAAGAGAAGCGTAA

Domains

Predicted by InterProScan.

HTH domain found in ParB protein (HTH_ParB)

(164-215)

ParB/Sulfiredoxin domain (ParB_N)

(25-113)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

41.538

91.873

0.382

Multiple sequence alignment