Detailed information
Bioinformatically predicted
Overview
| Name | comA | Type | Regulator |
| Locus tag | BSO20_RS05680 | Genome accession | NZ_CP018200 |
| Coordinates | 1278797..1279462 (-) | Length | 221 a.a. |
| NCBI ID | WP_032871259.1 | Uniprot ID | - |
| Organism | Bacillus amyloliquefaciens strain WS-8 | ||
| Function | promoting transcription of comS (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1273797..1284462
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BSO20_RS05670 (BSO20_05675) | - | 1275153..1278335 (-) | 3183 | WP_032874560.1 | type 2 lanthipeptide synthetase LanM family protein | - |
| BSO20_RS05675 (BSO20_05680) | - | 1278422..1278604 (-) | 183 | WP_032874558.1 | plantaricin C family lantibiotic | - |
| BSO20_RS05680 (BSO20_05685) | comA | 1278797..1279462 (-) | 666 | WP_032871259.1 | response regulator transcription factor | Regulator |
| BSO20_RS05685 (BSO20_05690) | - | 1279474..1280724 (-) | 1251 | WP_032874556.1 | sensor histidine kinase | - |
| BSO20_RS05690 (BSO20_05695) | - | 1280790..1280981 (-) | 192 | WP_003154894.1 | hypothetical protein | - |
| BSO20_RS05695 (BSO20_05700) | - | 1280999..1281730 (-) | 732 | WP_032874554.1 | ABC transporter permease | - |
| BSO20_RS05700 (BSO20_05705) | - | 1281711..1282646 (-) | 936 | WP_065465011.1 | ABC transporter ATP-binding protein | - |
| BSO20_RS05705 (BSO20_05710) | - | 1282766..1284124 (-) | 1359 | WP_032874552.1 | sensor histidine kinase | - |
Sequence
Protein
Download Length: 221 a.a. Molecular weight: 25144.33 Da Isoelectric Point: 6.2410
>NTDB_id=173845 BSO20_RS05680 WP_032871259.1 1278797..1279462(-) (comA) [Bacillus amyloliquefaciens strain WS-8]
MIKILLIDDHIGVAQGTKAILEKSNKMGVTILSCCKEVLNHLKHYEYDLLLLDLYMPELNGMELSKMILRESPDQKIIIY
TGFDISVHFNLLVEVGVSGFISKSSTEEHMIKVIESVIEGDTIIPTHLFKQLRRTEANTFNIDKLEDRIRDITLNEREQD
ILAGVAEGMTNRELSAKLLISQRAVEYILTGVYNKLGVKSRTEALIKANRYSLISMKTIYE
MIKILLIDDHIGVAQGTKAILEKSNKMGVTILSCCKEVLNHLKHYEYDLLLLDLYMPELNGMELSKMILRESPDQKIIIY
TGFDISVHFNLLVEVGVSGFISKSSTEEHMIKVIESVIEGDTIIPTHLFKQLRRTEANTFNIDKLEDRIRDITLNEREQD
ILAGVAEGMTNRELSAKLLISQRAVEYILTGVYNKLGVKSRTEALIKANRYSLISMKTIYE
Nucleotide
Download Length: 666 bp
>NTDB_id=173845 BSO20_RS05680 WP_032871259.1 1278797..1279462(-) (comA) [Bacillus amyloliquefaciens strain WS-8]
ATGATAAAGATTTTATTAATTGATGATCATATTGGTGTTGCTCAAGGGACAAAAGCCATTCTTGAAAAAAGCAATAAAAT
GGGAGTAACAATATTGTCTTGCTGTAAAGAAGTACTTAATCACCTTAAGCATTACGAGTATGACTTACTTTTACTTGATT
TATATATGCCGGAGTTAAATGGAATGGAATTGTCAAAAATGATTCTTAGAGAGAGTCCCGATCAAAAAATTATAATTTAT
ACTGGTTTTGATATCTCTGTCCATTTCAATCTTTTGGTTGAAGTTGGTGTTTCCGGGTTCATAAGTAAGTCTTCAACAGA
AGAGCATATGATAAAAGTAATCGAAAGTGTCATTGAGGGAGATACCATTATTCCTACTCATCTCTTTAAACAATTAAGAA
GAACAGAAGCAAATACGTTCAACATTGATAAGCTTGAAGATAGAATAAGAGATATTACTTTAAATGAAAGAGAACAAGAT
ATCTTAGCGGGCGTAGCGGAGGGAATGACAAACCGGGAATTATCAGCAAAGCTGTTGATCAGTCAAAGAGCGGTTGAATA
CATTCTTACTGGTGTGTACAACAAGCTCGGAGTAAAATCCAGAACAGAGGCGCTGATCAAAGCAAATCGATATTCATTAA
TTTCTATGAAAACTATATATGAGTAA
ATGATAAAGATTTTATTAATTGATGATCATATTGGTGTTGCTCAAGGGACAAAAGCCATTCTTGAAAAAAGCAATAAAAT
GGGAGTAACAATATTGTCTTGCTGTAAAGAAGTACTTAATCACCTTAAGCATTACGAGTATGACTTACTTTTACTTGATT
TATATATGCCGGAGTTAAATGGAATGGAATTGTCAAAAATGATTCTTAGAGAGAGTCCCGATCAAAAAATTATAATTTAT
ACTGGTTTTGATATCTCTGTCCATTTCAATCTTTTGGTTGAAGTTGGTGTTTCCGGGTTCATAAGTAAGTCTTCAACAGA
AGAGCATATGATAAAAGTAATCGAAAGTGTCATTGAGGGAGATACCATTATTCCTACTCATCTCTTTAAACAATTAAGAA
GAACAGAAGCAAATACGTTCAACATTGATAAGCTTGAAGATAGAATAAGAGATATTACTTTAAATGAAAGAGAACAAGAT
ATCTTAGCGGGCGTAGCGGAGGGAATGACAAACCGGGAATTATCAGCAAAGCTGTTGATCAGTCAAAGAGCGGTTGAATA
CATTCTTACTGGTGTGTACAACAAGCTCGGAGTAAAATCCAGAACAGAGGCGCTGATCAAAGCAAATCGATATTCATTAA
TTTCTATGAAAACTATATATGAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comA | Bacillus subtilis subsp. subtilis str. 168 |
40.758 |
95.475 |
0.389 |