Detailed information NTG0173835

Bioinformatically predicted

Overview

• Name: sepM
• Type: Regulator
• Locus tag: BSO20_RS04325
• Genome accession: NZ_CP018200
• Coordinates: 977178..978200 (-)
• Length: 340 a.a.
• NCBI ID: WP_007611255.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain WS-8
• Function: processing of CSP (predicted from homology) Competence regulation

Genomic Context

Location: 972178..983200

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BSO20_RS04295 (BSO20_04300)	-	972686..973567 (-)	882	WP_032874819.1	2-dehydropantoate 2-reductase	-
BSO20_RS04300 (BSO20_04305)	-	973730..974212 (+)	483	WP_007611262.1	N-acetyltransferase	-
BSO20_RS04305 (BSO20_04310)	gerR	974252..974827 (-)	576	WP_032874817.1	sporulation-specific transcriptional regulator GerR	-
BSO20_RS04310 (BSO20_04315)	rpmF	974984..975163 (-)	180	WP_003154457.1	50S ribosomal protein L32	-
BSO20_RS04315 (BSO20_04320)	-	975185..975703 (-)	519	WP_007611260.1	YceD family protein	-
BSO20_RS04320 (BSO20_04325)	-	975912..977159 (+)	1248	WP_032874815.1	nucleotidyltransferase	-
BSO20_RS04325 (BSO20_04330)	sepM	977178..978200 (-)	1023	WP_007611255.1	SepM family pheromone-processing serine protease	Regulator
BSO20_RS04330 (BSO20_04335)	-	978206..978985 (-)	780	WP_014304961.1	patatin family protein	-
BSO20_RS04335 (BSO20_04340)	ylbJ	979165..980391 (+)	1227	WP_032874813.1	sporulation integral membrane protein YlbJ	-
BSO20_RS04340 (BSO20_04345)	coaD	980410..980892 (-)	483	WP_014417707.1	pantetheine-phosphate adenylyltransferase	-
BSO20_RS04345 (BSO20_04350)	rsmD	980897..981451 (-)	555	WP_007409693.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
BSO20_RS04350 (BSO20_04355)	-	981750..982022 (-)	273	WP_014417705.1	YlbG family protein	-
BSO20_RS04355 (BSO20_04360)	ylbF	982081..982530 (-)	450	WP_032874811.1	YlbF family regulator	Regulator
BSO20_RS04360 (BSO20_04365)	-	982601..982840 (-)	240	WP_003154475.1	YlbE-like family protein	-

Sequence

Protein

• Length: 340 a.a.
• Molecular weight: 37424.93 Da
• Isoelectric Point: 7.3836

>NTDB_id=173835 BSO20_RS04325 WP_007611255.1 977178..978200(-) (sepM) [Bacillus amyloliquefaciens strain WS-8]
MKAKHFRWVFIILILLIAVTFIKLPYYITQPGEASELRPLIKVDGGYPEKGSLSLMTVKVGPANPYTYLWAKVHPYDEIV
SDESIKEEGESDSDYMKRQLQMMKSSQENAVIAAYQKAGKQVKYSFNGIYASSVVSDMPAKGKIEVGDKIISADGKTYES
AEKLIDYISSKKAGEKVTFHIERDTKEKTVDIVLKSFPDDPKRAGIGVALYTDRNVKVKPDLHFSIENIGGPSAGLMMSL
EIYNQLTKPDETKGYNIAGTGTIDVDGKVGPIGGIDQKVVAADKAGKDIFFAPNQNGAENSDYKNAVKTAKAIKSDMKIV
PVDTMQDALDYLDQLKVKST

Nucleotide

• Length: 1023 bp

>NTDB_id=173835 BSO20_RS04325 WP_007611255.1 977178..978200(-) (sepM) [Bacillus amyloliquefaciens strain WS-8]
ATGAAAGCAAAACATTTTCGCTGGGTGTTTATCATCCTGATCTTATTAATCGCTGTTACATTTATTAAGCTTCCGTATTA
CATCACACAGCCGGGAGAAGCATCAGAGCTGAGACCGCTGATTAAGGTGGACGGAGGTTATCCTGAAAAAGGAAGCCTTT
CCTTGATGACTGTCAAAGTAGGCCCCGCCAATCCGTATACATATCTTTGGGCGAAAGTGCATCCTTACGATGAAATCGTC
TCTGATGAAAGCATAAAAGAAGAGGGCGAATCGGACTCGGATTATATGAAGCGCCAGCTGCAAATGATGAAAAGCTCCCA
AGAAAACGCGGTCATTGCCGCTTATCAAAAAGCCGGGAAACAGGTGAAATACTCATTTAACGGCATTTATGCCAGTTCAG
TCGTCTCTGACATGCCGGCAAAAGGAAAAATAGAGGTCGGTGATAAAATCATCAGCGCGGACGGGAAAACATACGAATCC
GCTGAAAAGCTGATTGATTATATCAGCAGCAAAAAAGCGGGGGAAAAAGTAACGTTTCACATTGAACGGGACACGAAAGA
AAAGACCGTTGACATTGTGCTGAAATCATTCCCGGACGACCCGAAAAGAGCGGGAATCGGCGTCGCATTATATACGGACC
GGAACGTGAAAGTGAAGCCGGATCTTCATTTCAGCATTGAAAACATCGGCGGGCCTTCTGCGGGTCTCATGATGTCTTTA
GAAATTTACAACCAGCTGACAAAACCTGACGAAACAAAAGGCTATAATATAGCCGGAACGGGGACAATCGACGTGGACGG
CAAAGTCGGACCGATCGGCGGAATCGATCAGAAAGTCGTCGCCGCAGACAAAGCGGGAAAAGATATTTTCTTTGCGCCGA
ATCAAAACGGAGCTGAAAATTCTGATTACAAAAATGCGGTAAAAACGGCGAAAGCAATCAAGTCCGATATGAAGATCGTC
CCTGTCGACACCATGCAGGACGCACTTGACTATTTGGATCAGCTGAAAGTAAAAAGCACCTGA

Domains

Predicted by InterProScan.

• Lon protease (S16) C-terminal proteolytic domain (Lon_C) (230-330)

• PDZ domain (PDZ_2) (127-193)

• Peptidase family M50 (Peptidase_M50) (100-218)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
sepM	Streptococcus mutans UA159	38.596	100	0.388