Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilZ   Type   Machinery gene
Locus tag   A1D14_RS07060 Genome accession   NZ_CP014760
Coordinates   1523517..1523858 (+) Length   113 a.a.
NCBI ID   WP_014843813.1    Uniprot ID   -
Organism   Legionella pneumophila strain F4469     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1518517..1528858
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A1D14_RS07035 (A1D14_06870) acpP 1519345..1519593 (+) 249 WP_003631752.1 acyl carrier protein -
  A1D14_RS07040 (A1D14_06875) fabF 1519613..1520851 (+) 1239 WP_011946414.1 beta-ketoacyl-ACP synthase II -
  A1D14_RS07045 (A1D14_06880) mltG 1520852..1521850 (+) 999 WP_014843810.1 endolytic transglycosylase MltG -
  A1D14_RS07050 (A1D14_06885) tmk 1521850..1522488 (+) 639 WP_014843811.1 dTMP kinase -
  A1D14_RS07055 (A1D14_06890) - 1522485..1523390 (+) 906 WP_014843812.1 DNA polymerase III subunit delta' C-terminal domain-containing protein -
  A1D14_RS07060 (A1D14_06895) pilZ 1523517..1523858 (+) 342 WP_014843813.1 PilZ domain-containing protein Machinery gene
  A1D14_RS07065 (A1D14_06900) - 1523914..1524702 (+) 789 WP_027224933.1 TatD family hydrolase -
  A1D14_RS07070 (A1D14_06905) - 1524814..1525914 (+) 1101 WP_027224934.1 anhydro-N-acetylmuramic acid kinase -
  A1D14_RS07075 (A1D14_06910) - 1525970..1527262 (+) 1293 WP_027224935.1 MFS transporter -
  A1D14_RS15985 - 1527335..1527478 (+) 144 WP_172407120.1 hypothetical protein -

Sequence

Protein


Download         Length: 113 a.a.        Molecular weight: 12535.57 Da        Isoelectric Point: 8.2421

>NTDB_id=173723 A1D14_RS07060 WP_014843813.1 1523517..1523858(+) (pilZ) [Legionella pneumophila strain F4469]
MTEKPQLINCSFPNEASLYMAYMPFVKGGGLFIRTQHVYSLGQSLELSVKLLNENEPYLVTGKIVWITPKGAQGNKPPGV
GIQFTGENSRYLCNKIETYLAGMLKSCQITDTI

Nucleotide


Download         Length: 342 bp        

>NTDB_id=173723 A1D14_RS07060 WP_014843813.1 1523517..1523858(+) (pilZ) [Legionella pneumophila strain F4469]
ATGACCGAAAAACCACAGCTTATAAACTGCTCATTTCCCAATGAAGCATCTTTGTACATGGCTTACATGCCTTTTGTGAA
AGGTGGCGGTCTTTTTATAAGAACTCAACACGTTTATTCTCTAGGGCAGTCGCTTGAATTATCTGTTAAATTGCTCAATG
AAAATGAACCATATTTAGTCACTGGTAAAATAGTCTGGATTACTCCTAAAGGTGCACAAGGTAATAAGCCACCGGGAGTT
GGTATTCAATTTACCGGTGAAAACAGTCGTTATCTATGTAACAAGATAGAAACTTATTTGGCAGGAATGCTAAAATCATG
TCAGATTACAGATACTATATAG

Domains

Predicted by InterproScan.

PilZ domain (PilZ)

(8-101)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilZ Legionella pneumophila str. Paris

99.115

100

0.991
  pilZ Legionella pneumophila strain ERS1305867

99.115

100

0.991

Multiple sequence alignment