Detailed information
Bioinformatically predicted
Overview
| Name | fimT | Type | Machinery gene |
| Locus tag | A1D13_RS03275 | Genome accession | NZ_CP014759 |
| Coordinates | 676197..676904 (-) | Length | 235 a.a. |
| NCBI ID | WP_011945794.1 | Uniprot ID | A0AAN5T2E4 |
| Organism | Legionella pneumophila strain F4468 | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 671197..681904
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A1D13_RS03260 (A1D13_03155) | - | 674072..674584 (-) | 513 | WP_011945791.1 | pilus assembly protein | - |
| A1D13_RS03265 (A1D13_03160) | - | 674581..675648 (-) | 1068 | WP_011945792.1 | PilW family protein | - |
| A1D13_RS03270 (A1D13_03165) | pilV | 675645..676184 (-) | 540 | WP_011945793.1 | type IV pilus modification protein PilV | - |
| A1D13_RS03275 (A1D13_03170) | fimT | 676197..676904 (-) | 708 | WP_011945794.1 | GspH/FimT family pseudopilin | Machinery gene |
| A1D13_RS03280 (A1D13_03175) | - | 677127..677987 (-) | 861 | WP_011945795.1 | polysaccharide deacetylase family protein | - |
| A1D13_RS03285 (A1D13_03180) | - | 678163..679512 (-) | 1350 | WP_072368662.1 | lpg0634 family Dot/Icm T4SS effector | - |
| A1D13_RS03290 (A1D13_03185) | - | 679802..681283 (+) | 1482 | WP_011945797.1 | ArnT family glycosyltransferase | - |
Sequence
Protein
Download Length: 235 a.a. Molecular weight: 24849.51 Da Isoelectric Point: 7.5609
>NTDB_id=173672 A1D13_RS03275 WP_011945794.1 676197..676904(-) (fimT) [Legionella pneumophila strain F4468]
MNKVITESQRFTLRNVANMLLCVDASVLPTQSNIAQKIQTKGIMYNDLCKDSFDTEVPLNSNPLSIAGFTLVELLVTLSV
FAIILTLIVPSLRTMILNSRLTSNIDSLVSSLNYARGVALDRAVNVAVCPLGSPGSTACGANWSSGWIVVTQPVAGAPTL
LKSHQTSVNDPVITSNVSSVVFDPHGLSTTQSNFTMCDNRGNAFARSAMVLATGFVQSGTTPGQAVWSNGALNCP
MNKVITESQRFTLRNVANMLLCVDASVLPTQSNIAQKIQTKGIMYNDLCKDSFDTEVPLNSNPLSIAGFTLVELLVTLSV
FAIILTLIVPSLRTMILNSRLTSNIDSLVSSLNYARGVALDRAVNVAVCPLGSPGSTACGANWSSGWIVVTQPVAGAPTL
LKSHQTSVNDPVITSNVSSVVFDPHGLSTTQSNFTMCDNRGNAFARSAMVLATGFVQSGTTPGQAVWSNGALNCP
Nucleotide
Download Length: 708 bp
>NTDB_id=173672 A1D13_RS03275 WP_011945794.1 676197..676904(-) (fimT) [Legionella pneumophila strain F4468]
TTGAACAAAGTGATAACGGAATCACAAAGGTTCACTCTGCGCAACGTAGCTAATATGTTATTGTGTGTGGATGCTAGTGT
ATTGCCCACACAATCTAATATAGCACAAAAGATACAAACAAAAGGCATAATGTACAATGACCTTTGTAAAGACAGCTTCG
ATACTGAGGTCCCTCTTAACAGCAACCCTCTTTCCATAGCCGGATTCACACTGGTTGAATTATTAGTAACCCTATCTGTT
TTTGCCATTATCTTAACTCTAATCGTCCCTTCATTAAGAACTATGATTTTGAATAGCCGTTTGACTTCAAACATCGACTC
ACTGGTAAGCTCATTAAACTATGCGCGTGGAGTGGCACTTGATCGGGCAGTCAATGTGGCAGTATGTCCATTAGGTTCAC
CAGGTTCAACAGCCTGTGGAGCCAACTGGAGCTCAGGATGGATAGTAGTGACCCAACCAGTAGCAGGAGCACCAACGCTT
TTAAAATCGCACCAGACTTCAGTAAATGATCCTGTTATCACTTCGAACGTATCCAGTGTTGTTTTTGACCCACATGGGTT
ATCAACAACCCAAAGTAACTTCACTATGTGTGATAACCGAGGCAATGCGTTTGCCCGCTCGGCAATGGTTTTGGCCACTG
GATTTGTCCAATCAGGAACAACACCCGGCCAGGCAGTCTGGAGTAATGGAGCTCTGAACTGCCCTTAA
TTGAACAAAGTGATAACGGAATCACAAAGGTTCACTCTGCGCAACGTAGCTAATATGTTATTGTGTGTGGATGCTAGTGT
ATTGCCCACACAATCTAATATAGCACAAAAGATACAAACAAAAGGCATAATGTACAATGACCTTTGTAAAGACAGCTTCG
ATACTGAGGTCCCTCTTAACAGCAACCCTCTTTCCATAGCCGGATTCACACTGGTTGAATTATTAGTAACCCTATCTGTT
TTTGCCATTATCTTAACTCTAATCGTCCCTTCATTAAGAACTATGATTTTGAATAGCCGTTTGACTTCAAACATCGACTC
ACTGGTAAGCTCATTAAACTATGCGCGTGGAGTGGCACTTGATCGGGCAGTCAATGTGGCAGTATGTCCATTAGGTTCAC
CAGGTTCAACAGCCTGTGGAGCCAACTGGAGCTCAGGATGGATAGTAGTGACCCAACCAGTAGCAGGAGCACCAACGCTT
TTAAAATCGCACCAGACTTCAGTAAATGATCCTGTTATCACTTCGAACGTATCCAGTGTTGTTTTTGACCCACATGGGTT
ATCAACAACCCAAAGTAACTTCACTATGTGTGATAACCGAGGCAATGCGTTTGCCCGCTCGGCAATGGTTTTGGCCACTG
GATTTGTCCAATCAGGAACAACACCCGGCCAGGCAGTCTGGAGTAATGGAGCTCTGAACTGCCCTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimT | Legionella pneumophila strain Lp02 |
96.17 |
100 |
0.962 |