Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   BSR19_RS02835 Genome accession   NZ_CP018187
Coordinates   554767..556554 (+) Length   595 a.a.
NCBI ID   WP_156246514.1    Uniprot ID   -
Organism   Streptococcus salivarius strain ICDC2     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 549767..561554
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BSR19_RS02815 (BSR19_02825) - 550346..551899 (+) 1554 WP_156246503.1 BCCT family transporter -
  BSR19_RS02820 - 551909..552028 (+) 120 WP_156246504.1 LysR family transcriptional regulator -
  BSR19_RS02825 (BSR19_02830) - 552071..552802 (+) 732 WP_156246506.1 LysR family transcriptional regulator substrate-binding protein -
  BSR19_RS02830 (BSR19_02835) rcrP 553018..554754 (+) 1737 WP_156246510.1 ABC transporter ATP-binding protein Regulator
  BSR19_RS02835 (BSR19_02840) rcrQ 554767..556554 (+) 1788 WP_156246514.1 ABC transporter ATP-binding protein Regulator
  BSR19_RS02840 (BSR19_02845) queA 556652..557695 (-) 1044 WP_070476548.1 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA -
  BSR19_RS02845 (BSR19_02850) - 557846..558547 (+) 702 WP_156246516.1 glucosamine-6-phosphate deaminase -
  BSR19_RS02850 (BSR19_02855) - 558737..559720 (+) 984 WP_156246518.1 rhodanese-related sulfurtransferase -
  BSR19_RS11575 - 559786..559983 (+) 198 Protein_512 hypothetical protein -
  BSR19_RS02860 (BSR19_02860) - 560062..560832 (+) 771 WP_156246520.1 nucleoside phosphorylase -

Sequence

Protein


Download         Length: 595 a.a.        Molecular weight: 66617.77 Da        Isoelectric Point: 5.3822

>NTDB_id=173608 BSR19_RS02835 WP_156246514.1 554767..556554(+) (rcrQ) [Streptococcus salivarius strain ICDC2]
MKNNKKKTNHSSSFGRLWSYLQVYRFPLYLAIFLKIVSVIMSVLEPVVIGLAITELTKNTLNIIKGVEGAHINVPYVGLV
LVFYLLRGLIYELAVYYSNYFMTNAVQATVQDMRNEMTEKINRTSVSYFDKHQFGDLLGRFTSDVETVSNALQQSFLQVV
NAVFTLALVIGTVLYLNLQLGAIVVVTIPITYFGARFIMSKSQPYFKQQADALGTLNGFVQENLTGFNVLKLFGREDKSL
DDFKEITEDLQKVGFKANFISGLMMPVLNGLSDLTYLIVAVLGGLQVLAGRLTIGNMQAFVQYVWQINQPIQNLTQLAGQ
LQSAKSSLDRIFQLMDEPDEANDATEVLEGDLTGRVSFKHVDFQYVADKPLIRDFNLEVNPGEMVAIVGPTGAGKSTIIN
LLMRFYDVTAGSISVDGHDIRNLSRQDYRKQFGMVLQDAWLFEGTIKENLRFGNLEATDEEIVEAAKAANVDHFIRTLPG
GYNMEMNQESSNISLGQKQLLTIARALLADPKILILDEATSSVDTRLELLIQKAMKTLMQGRTSFVIAHRLSTIQEADKI
LVLKDGQIIEQGNHESLLADKGFYYDLYNSQFAEK

Nucleotide


Download         Length: 1788 bp        

>NTDB_id=173608 BSR19_RS02835 WP_156246514.1 554767..556554(+) (rcrQ) [Streptococcus salivarius strain ICDC2]
ATGAAGAATAATAAAAAGAAAACAAATCATTCCTCAAGTTTTGGCCGTCTTTGGTCATACTTGCAGGTTTATCGTTTCCC
ACTTTACCTAGCTATTTTCCTGAAAATTGTTAGTGTCATTATGAGTGTTCTCGAACCTGTGGTCATTGGTTTAGCCATTA
CCGAGTTGACTAAAAATACACTGAACATCATTAAGGGGGTAGAAGGGGCTCATATCAACGTGCCCTACGTTGGGTTAGTT
TTGGTCTTTTACCTCTTGCGTGGTCTCATTTATGAGTTGGCTGTCTACTATTCTAACTATTTCATGACCAATGCTGTGCA
AGCAACGGTTCAGGATATGCGAAATGAGATGACTGAGAAAATCAATCGTACCTCAGTGTCATACTTTGATAAGCATCAAT
TTGGAGACCTTTTGGGTCGCTTTACGAGTGACGTTGAGACAGTTTCGAATGCCTTGCAGCAGTCCTTCTTGCAGGTTGTC
AATGCCGTCTTTACTCTAGCCTTGGTTATTGGGACAGTGCTTTACCTTAATCTTCAATTGGGAGCTATAGTTGTCGTCAC
TATTCCCATTACTTACTTTGGCGCTCGCTTCATTATGAGTAAGTCTCAACCTTACTTTAAGCAGCAGGCTGATGCCCTAG
GTACTCTTAACGGTTTTGTTCAGGAAAATCTGACTGGTTTCAATGTGCTTAAACTTTTTGGCCGTGAGGATAAATCTTTA
GACGACTTTAAAGAGATTACGGAAGACCTTCAGAAGGTAGGTTTTAAGGCCAATTTCATTTCAGGCCTCATGATGCCTGT
ACTTAATGGTTTATCTGACTTGACCTATCTAATTGTCGCTGTTCTAGGTGGTTTGCAAGTTTTGGCTGGTCGCTTGACGA
TTGGTAATATGCAGGCCTTTGTTCAGTACGTTTGGCAGATTAATCAACCTATTCAGAACTTGACTCAGTTAGCTGGACAA
TTGCAGAGTGCTAAGTCTTCTTTGGACCGTATTTTCCAACTGATGGATGAACCAGACGAGGCTAATGATGCTACTGAAGT
GCTTGAAGGAGATTTGACCGGTCGGGTTAGCTTTAAGCATGTAGACTTCCAGTATGTGGCTGATAAACCTTTGATTCGTG
ACTTTAATCTTGAAGTCAATCCTGGCGAAATGGTCGCTATTGTCGGCCCAACTGGTGCCGGAAAATCAACGATTATCAAT
CTTCTCATGCGTTTCTATGATGTGACTGCAGGTTCTATCTCGGTTGATGGTCATGATATTCGTAACTTATCACGTCAGGA
TTATCGTAAACAGTTTGGTATGGTACTTCAGGATGCTTGGCTCTTTGAAGGAACTATCAAGGAAAATCTTCGCTTTGGTA
ATCTTGAGGCAACTGACGAAGAAATTGTTGAAGCCGCTAAGGCTGCCAATGTGGACCACTTTATCCGTACGCTACCTGGC
GGTTACAACATGGAAATGAACCAGGAATCAAGTAACATTTCACTGGGACAAAAGCAACTTTTGACCATTGCGCGTGCGCT
TTTGGCTGATCCGAAAATTTTGATTTTGGACGAGGCAACCTCATCAGTTGATACCCGTTTGGAACTCTTGATTCAAAAGG
CTATGAAGACTCTCATGCAGGGTCGAACAAGCTTTGTCATCGCTCACCGTTTATCAACTATCCAAGAAGCAGACAAGATT
TTGGTCCTTAAAGATGGTCAAATCATCGAACAAGGGAACCATGAATCCCTTCTTGCAGATAAAGGCTTCTATTACGATTT
GTATAATAGCCAGTTTGCAGAGAAATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(373-521)

ABC transporter transmembrane region (ABC_membrane)

(29-310)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

42.211

100

0.424