Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   BSR19_RS02830 Genome accession   NZ_CP018187
Coordinates   553018..554754 (+) Length   578 a.a.
NCBI ID   WP_156246510.1    Uniprot ID   -
Organism   Streptococcus salivarius strain ICDC2     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 548018..559754
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BSR19_RS11795 - 548212..548334 (+) 123 WP_002269975.1 hypothetical protein -
  BSR19_RS11445 (BSR19_02810) - 548391..549467 (+) 1077 WP_414820571.1 CHAP domain-containing protein -
  BSR19_RS02805 (BSR19_02815) - 549525..550118 (+) 594 Protein_503 type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein -
  BSR19_RS02815 (BSR19_02825) - 550346..551899 (+) 1554 WP_156246503.1 BCCT family transporter -
  BSR19_RS02820 - 551909..552028 (+) 120 WP_156246504.1 LysR family transcriptional regulator -
  BSR19_RS02825 (BSR19_02830) - 552071..552802 (+) 732 WP_156246506.1 LysR family transcriptional regulator substrate-binding protein -
  BSR19_RS02830 (BSR19_02835) rcrP 553018..554754 (+) 1737 WP_156246510.1 ABC transporter ATP-binding protein Regulator
  BSR19_RS02835 (BSR19_02840) rcrQ 554767..556554 (+) 1788 WP_156246514.1 ABC transporter ATP-binding protein Regulator
  BSR19_RS02840 (BSR19_02845) queA 556652..557695 (-) 1044 WP_070476548.1 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA -
  BSR19_RS02845 (BSR19_02850) - 557846..558547 (+) 702 WP_156246516.1 glucosamine-6-phosphate deaminase -
  BSR19_RS02850 (BSR19_02855) - 558737..559720 (+) 984 WP_156246518.1 rhodanese-related sulfurtransferase -

Sequence

Protein


Download         Length: 578 a.a.        Molecular weight: 64876.77 Da        Isoelectric Point: 5.3001

>NTDB_id=173607 BSR19_RS02830 WP_156246510.1 553018..554754(+) (rcrP) [Streptococcus salivarius strain ICDC2]
MAYIWYYLRRYPKWLAMNFTAAILFVIANLGLPTVLARMIDEGINRGDVDKLYAYAWVMFGVVLTGIVGRILLSYAVGKL
TTTMVQVMRNDIYAKLQEYSHHEYEQIGVSSLVTRITSDAFVLMQFADQVLKLGVITPLMMVSSVFLILTTSPSLAWIVA
ISLPFLAVVVWYVAVKTRPLSEKQQATLDKINQYARENLTGLRVIRAFAREDFQEKKFASENAVYADNSNKLFKLTGLTE
PLFVQIIIAMIVAIVWFALEPLGSGTLAIGDLVAFIEYSFHALLSFLFLANLFTMYPRTAVSSERLQEIMDMPISINPNE
DGVTETETKGYLEFDNVTFAYPGETESPVLHNISFKAKPGETIAFIGSTGSGKSSLVQLIPRFYDVTLGRILVDGVDVRD
YNLKALRRKIGFIPQKALLFTGTIGENIRYGKENASHEELNQATDVAQAKEFIESKEERYDSHLAEGGSNLSGGQKQRLS
IARAVVKRPDLYIFDDSFSALDYKTDATLRRRLKEVTQDATVLIVAQRVGTIMDADQIIVLDEGEIVGRGRHEELMESND
IYREIANSQLNQKSLTED

Nucleotide


Download         Length: 1737 bp        

>NTDB_id=173607 BSR19_RS02830 WP_156246510.1 553018..554754(+) (rcrP) [Streptococcus salivarius strain ICDC2]
ATGGCTTATATTTGGTATTATCTCAGGCGTTATCCTAAGTGGCTGGCGATGAATTTTACGGCGGCCATTTTATTTGTTAT
TGCTAACCTGGGTCTGCCGACGGTTCTTGCCAGAATGATTGATGAGGGAATAAACCGTGGTGATGTTGATAAGCTTTACG
CTTATGCTTGGGTCATGTTTGGTGTAGTTTTGACTGGGATTGTTGGTCGTATACTTCTGTCCTATGCGGTTGGTAAATTG
ACCACTACTATGGTGCAAGTCATGCGTAATGACATTTATGCTAAGCTTCAGGAGTATTCCCACCACGAGTATGAGCAGAT
AGGGGTATCCTCTTTGGTGACTCGTATTACATCAGATGCTTTTGTGCTTATGCAGTTTGCGGATCAGGTTCTTAAGCTAG
GTGTTATCACTCCTTTGATGATGGTTTCCAGTGTCTTTTTGATTTTGACGACAAGTCCATCTTTGGCTTGGATTGTGGCC
ATCTCCTTGCCTTTCCTAGCCGTAGTAGTCTGGTATGTGGCGGTAAAAACGCGTCCGCTTTCTGAAAAGCAACAGGCAAC
TCTCGACAAGATTAACCAGTATGCTCGTGAAAATCTGACTGGACTTCGTGTCATTCGTGCTTTCGCTAGAGAAGATTTTC
AAGAGAAGAAGTTCGCTTCTGAAAATGCTGTCTATGCGGATAATTCAAACAAACTTTTTAAATTGACTGGTTTGACCGAG
CCACTTTTTGTGCAAATCATCATTGCCATGATTGTGGCTATTGTTTGGTTTGCCCTAGAGCCATTAGGTTCTGGAACTTT
GGCAATTGGGGACTTGGTTGCCTTTATTGAGTACAGTTTCCATGCACTATTGTCCTTCCTCTTCTTAGCTAATCTCTTTA
CCATGTATCCTCGTACGGCAGTATCTAGTGAACGTCTGCAGGAAATTATGGACATGCCTATTTCTATCAATCCAAATGAA
GATGGGGTGACAGAGACTGAAACTAAGGGATATTTGGAATTTGATAATGTGACCTTCGCCTATCCTGGTGAGACGGAGAG
TCCTGTCCTACACAATATTTCTTTCAAGGCAAAACCTGGTGAAACCATTGCCTTTATTGGGTCTACGGGTTCAGGAAAAT
CATCACTTGTACAGTTGATTCCACGCTTTTATGATGTCACACTTGGACGCATTCTTGTTGATGGTGTAGATGTTCGTGAC
TACAATCTTAAGGCTCTTCGTCGTAAGATTGGCTTTATTCCACAAAAAGCCCTACTCTTTACAGGGACTATCGGTGAAAA
TATCCGTTATGGTAAGGAAAATGCCAGTCATGAAGAATTGAATCAAGCTACTGATGTGGCTCAAGCCAAGGAATTTATCG
AAAGTAAGGAAGAACGCTATGATTCTCACTTGGCTGAGGGTGGCAGCAACCTTTCTGGGGGACAGAAGCAGCGTTTGTCA
ATTGCACGTGCGGTGGTTAAACGTCCTGATCTCTATATCTTTGATGATTCCTTCTCTGCCTTGGACTACAAGACTGATGC
GACCTTGCGCCGTCGTCTAAAAGAAGTGACTCAAGATGCGACAGTCCTGATTGTAGCCCAACGTGTGGGAACTATCATGG
ATGCTGATCAAATCATTGTTTTGGATGAAGGTGAAATCGTTGGTCGTGGCCGTCATGAAGAGCTTATGGAAAGCAATGAC
ATTTACCGTGAAATTGCTAATTCACAATTGAATCAAAAGAGTCTTACGGAAGACTAG

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(17-279)

ABC transporter (ABC_tran)

(350-497)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

39.85

92.042

0.367