Detailed information NTG0173573

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: BSR14_RS10240
• Genome accession: NZ_CP018186
• Coordinates: 2179336..2180436 (+)
• Length: 366 a.a.
• NCBI ID: WP_156209990.1
• Uniprot ID: -
• Organism: Streptococcus salivarius strain ICDC1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2174336..2185436

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BSR14_RS10215 (BSR14_10325)	pgsA	2174878..2175420 (-)	543	WP_002885640.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
BSR14_RS10220 (BSR14_10330)	-	2175433..2176290 (-)	858	WP_156209986.1	helix-turn-helix domain-containing protein	-
BSR14_RS10225 (BSR14_10335)	yfmH	2176349..2177626 (-)	1278	WP_156209987.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
BSR14_RS10230 (BSR14_10340)	yfmF	2177628..2178878 (-)	1251	WP_156209988.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
BSR14_RS10235 (BSR14_10345)	yaaA	2178956..2179333 (+)	378	WP_156209989.1	S4 domain-containing protein YaaA	-
BSR14_RS10240 (BSR14_10350)	recF	2179336..2180436 (+)	1101	WP_156209990.1	DNA replication/repair protein RecF	Machinery gene
BSR14_RS10245 (BSR14_10355)	guaB	2180618..2182099 (-)	1482	WP_013991341.1	IMP dehydrogenase	-
BSR14_RS10250 (BSR14_10360)	trpS	2182278..2183300 (-)	1023	WP_118172343.1	tryptophan--tRNA ligase	-
BSR14_RS10255 (BSR14_10365)	-	2183729..2184601 (+)	873	WP_014632477.1	YitT family protein	-

Sequence

Protein

• Length: 366 a.a.
• Molecular weight: 42232.27 Da
• Isoelectric Point: 8.4088

>NTDB_id=173573 BSR14_RS10240 WP_156209990.1 2179336..2180436(+) (recF) [Streptococcus salivarius strain ICDC1]
MWLEKIDIQHFRNYTEASVSFSPHLNIFLGRNAQGKTNILEAIYFLALTRSHRTRSDKELIQFQQNTLKLNGIVHRHSGK
LPLEISLSNKGRITKVNHLKQAKLSDYIGHMTVVLFAPEDLQLVKGSPSLRRKFIDIDLGQIKPVYLSDLSSYNHVLKQR
NAYLKSTDNVDINFLSVLDEQLSDFGTRVIEHRLEFIKQLEEEADRHHSNLSNQIERLKISYESNIPLENNKVIRESFLT
TLKQNHKRDIFKKNTGVGPHRDDLTFYINDMNASFGSQGQQRSLILSLKMAEIALIKKVTGEFPILLLDDVMSELDNHRQ
LKLLESIDEEVQTFMTTTSLDHLSNLPPDLKTFLVKNGNIYEKQVD

Nucleotide

• Length: 1101 bp

>NTDB_id=173573 BSR14_RS10240 WP_156209990.1 2179336..2180436(+) (recF) [Streptococcus salivarius strain ICDC1]
ATGTGGCTCGAAAAAATTGATATTCAACACTTTAGAAATTATACTGAAGCCTCTGTGAGCTTCTCACCTCATCTCAATAT
TTTTCTTGGTCGCAACGCTCAAGGAAAAACAAATATTCTTGAGGCAATCTATTTTCTAGCATTGACACGTAGCCATCGGA
CCCGTTCAGATAAGGAACTGATTCAATTTCAGCAAAATACTCTCAAACTGAACGGCATCGTGCATCGTCATAGTGGGAAG
CTACCTCTGGAAATCAGTTTATCTAATAAAGGACGCATAACAAAGGTTAACCACCTCAAACAAGCTAAATTATCCGATTA
TATCGGTCACATGACTGTAGTGCTATTTGCTCCTGAGGATTTACAACTTGTAAAAGGATCTCCAAGCCTGAGACGTAAAT
TTATAGATATTGATTTAGGACAGATTAAGCCTGTTTATCTCTCAGACTTATCAAGTTATAATCATGTACTCAAACAACGT
AATGCTTATCTCAAATCTACTGACAATGTAGACATTAATTTCCTCTCAGTGTTAGATGAACAGCTTTCCGATTTTGGAAC
ACGAGTTATCGAACATAGACTAGAATTTATCAAGCAATTAGAGGAGGAGGCAGATAGACATCATAGTAACCTCTCAAATC
AGATAGAGCGCCTTAAAATCTCCTACGAATCTAATATCCCACTGGAAAATAACAAAGTTATTCGCGAATCATTTTTAACC
ACGTTAAAGCAAAATCACAAAAGAGATATCTTCAAAAAGAACACTGGTGTTGGTCCGCATAGGGATGATTTAACATTTTA
CATTAATGACATGAACGCATCTTTCGGTAGTCAGGGGCAGCAACGTAGCCTCATTCTTTCTTTAAAAATGGCTGAGATTG
CTCTGATAAAAAAAGTAACAGGTGAATTTCCTATTCTTCTCCTCGATGATGTCATGAGTGAGCTTGACAACCACCGTCAA
CTTAAACTGTTAGAAAGTATTGACGAAGAGGTTCAAACCTTCATGACGACAACTTCACTTGATCATCTGAGTAACCTACC
ACCTGATTTAAAGACCTTCTTAGTCAAGAATGGTAATATTTATGAAAAACAAGTCGATTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-343)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	65.084	97.814	0.637
recF	Bacillus subtilis subsp. subtilis str. 168	43.902	100	0.443