Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | A0W69_RS06575 | Genome accession | NZ_CP014742 |
| Coordinates | 1216660..1216962 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain WP2202 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1211660..1221962
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A0W69_RS06550 (A0W69_06550) | rpsR | 1212023..1212283 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| A0W69_RS06555 (A0W69_06555) | lon | 1212343..1214718 (-) | 2376 | WP_002853487.1 | endopeptidase La | - |
| A0W69_RS06560 (A0W69_06560) | - | 1214735..1215382 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| A0W69_RS06565 (A0W69_06565) | fliW | 1215543..1215932 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| A0W69_RS06570 (A0W69_06570) | proC | 1215932..1216663 (+) | 732 | WP_002864259.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| A0W69_RS06575 (A0W69_06575) | ctsT | 1216660..1216962 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| A0W69_RS06580 (A0W69_06580) | - | 1216959..1217621 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| A0W69_RS06585 (A0W69_06585) | - | 1217618..1218070 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| A0W69_RS06590 (A0W69_06590) | hemD | 1218067..1218696 (-) | 630 | WP_002878794.1 | uroporphyrinogen-III synthase | - |
| A0W69_RS06595 (A0W69_06595) | thiE | 1218674..1219306 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| A0W69_RS06600 (A0W69_06600) | thiD | 1219296..1220108 (-) | 813 | WP_002890078.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| A0W69_RS06605 (A0W69_06605) | - | 1220105..1220791 (-) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| A0W69_RS06610 (A0W69_06610) | - | 1220788..1221549 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=173510 A0W69_RS06575 WP_002853046.1 1216660..1216962(+) (ctsT) [Campylobacter jejuni strain WP2202]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=173510 A0W69_RS06575 WP_002853046.1 1216660..1216962(+) (ctsT) [Campylobacter jejuni strain WP2202]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |