Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   BSR08_RS18110 Genome accession   NZ_CP018184
Coordinates   3374082..3374930 (-) Length   282 a.a.
NCBI ID   WP_003226832.1    Uniprot ID   P26497
Organism   Bacillus subtilis strain KH2     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 3369082..3379930
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BSR08_RS18090 (BSR08_18345) yyaE 3369595..3371598 (-) 2004 WP_014481509.1 molybdopterin-dependent oxidoreductase -
  BSR08_RS18095 (BSR08_18350) yyzM 3371649..3371855 (-) 207 WP_003226838.1 DUF951 family protein -
  BSR08_RS18100 (BSR08_18355) - 3371949..3372965 (-) 1017 WP_010886647.1 membrane protein -
  BSR08_RS18105 (BSR08_18360) yyaC 3373425..3374042 (+) 618 WP_003243890.1 spore protease YyaC -
  BSR08_RS18110 (BSR08_18365) spo0J 3374082..3374930 (-) 849 WP_003226832.1 stage 0 sporulation protein Spo0J Regulator
  BSR08_RS18115 (BSR08_18370) soj 3374923..3375684 (-) 762 WP_003219244.1 sporulation initiation inhibitor protein Soj -
  BSR08_RS18120 (BSR08_18375) yyaB 3375932..3376372 (+) 441 WP_014481510.1 PH domain-containing protein -
  BSR08_RS18125 (BSR08_18380) noc 3376423..3377274 (-) 852 WP_003226829.1 nucleoid occlusion protein -
  BSR08_RS18130 (BSR08_18385) rsmG 3377396..3378115 (-) 720 WP_014481512.1 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG -

Sequence

Protein


Download         Length: 282 a.a.        Molecular weight: 32210.16 Da        Isoelectric Point: 8.3881

>NTDB_id=173437 BSR08_RS18110 WP_003226832.1 3374082..3374930(-) (spo0J) [Bacillus subtilis strain KH2]
MAKGLGKGINALFNQVDLSEETVEEIKIADLRPNPYQPRKHFDDEALAELKESVLQHGILQPLIVRKSLKGYDIVAGERR
FRAAKLAGLDTVPAIVRELSEALMREIALLENLQREDLSPLEEAQAYDSLLKHLDLTQEQLAKRLGKSRPHIANHLRLLT
LPENIQQLIAEGTLSMGHGRTLLGLKNKNKLEPLVQKVIAEQLNVRQLEQLIQQLNQNVPRETKKKEPVKDAVLKERESY
LQNYFGTTVNIKRQKKKGKIEIEFFSNEDLDRILELLSERES

Nucleotide


Download         Length: 849 bp        

>NTDB_id=173437 BSR08_RS18110 WP_003226832.1 3374082..3374930(-) (spo0J) [Bacillus subtilis strain KH2]
ATGGCTAAAGGCCTTGGAAAAGGGATTAATGCGTTATTTAATCAGGTAGATTTGTCTGAAGAGACAGTTGAAGAAATTAA
AATTGCCGATTTACGCCCTAATCCTTATCAGCCAAGAAAACACTTTGATGACGAGGCATTAGCTGAACTAAAAGAATCTG
TGCTGCAGCATGGCATTCTTCAGCCGCTTATCGTCAGAAAATCTTTAAAAGGCTATGATATTGTTGCGGGTGAACGGCGT
TTTCGAGCGGCAAAGCTGGCAGGTTTAGATACAGTTCCGGCCATTGTCCGTGAATTATCAGAGGCGTTAATGAGGGAAAT
TGCTTTATTAGAAAATCTTCAGCGTGAAGATTTATCTCCGCTTGAAGAGGCTCAGGCATATGACTCCTTGTTGAAACACT
TAGATCTCACACAAGAGCAGCTTGCCAAACGTCTTGGGAAAAGCAGACCGCATATTGCGAATCATTTAAGACTGCTGACA
CTGCCAGAAAATATTCAGCAGCTTATTGCCGAAGGTACGCTTTCTATGGGACATGGACGCACGCTTCTTGGCTTAAAAAA
CAAAAATAAGCTTGAACCGCTGGTACAAAAAGTGATTGCGGAGCAGCTCAATGTTCGCCAGCTTGAGCAGCTGATTCAGC
AGTTGAATCAGAATGTTCCACGTGAAACAAAGAAAAAAGAACCTGTGAAAGATGCGGTTCTAAAAGAGCGAGAATCCTAT
CTCCAAAATTATTTTGGAACAACAGTTAATATTAAAAGACAGAAGAAAAAAGGCAAAATCGAAATTGAATTTTTCTCTAA
TGAAGACCTTGACCGGATTTTAGAGCTTTTGTCTGAACGAGAATCATAA

Domains

Predicted by InterProScan.

HTH domain found in ParB protein (HTH_ParB)

(163-214)

ParB/Sulfiredoxin domain (ParB_N)

(24-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  PDB 5NOC
  PDB 6SDK

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

41.923

92.199

0.387