Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   BSR08_RS14650 Genome accession   NZ_CP018184
Coordinates   2708407..2709120 (-) Length   237 a.a.
NCBI ID   WP_014481000.1    Uniprot ID   -
Organism   Bacillus subtilis strain KH2     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2703407..2714120
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BSR08_RS14630 (BSR08_14830) ghrB 2703552..2704529 (+) 978 WP_072592561.1 D-glycerate dehydrogenase -
  BSR08_RS14635 (BSR08_14835) psdB 2704566..2706506 (-) 1941 WP_014480997.1 lantibiotic ABC transporter permease PsdB -
  BSR08_RS14640 (BSR08_14840) psdA 2706481..2707260 (-) 780 WP_014480998.1 lantibiotic ABC transporter ATP-binding protein PsdA -
  BSR08_RS14645 (BSR08_14845) psdS 2707343..2708413 (-) 1071 WP_014480999.1 two-component sensor histidine kinase PsdS -
  BSR08_RS14650 (BSR08_14850) braR 2708407..2709120 (-) 714 WP_014481000.1 two-component system response regulator PsdR Regulator
  BSR08_RS14655 (BSR08_14855) - 2709267..2709475 (+) 209 Protein_2894 hypothetical protein -
  BSR08_RS14660 (BSR08_14860) yvcN 2709511..2710275 (-) 765 WP_015251150.1 arylamine N-acetyltransferase -
  BSR08_RS14665 (BSR08_14865) crh 2710276..2710533 (-) 258 WP_003219835.1 HPr family phosphocarrier protein -
  BSR08_RS14670 (BSR08_14870) whiA 2710557..2711507 (-) 951 WP_003228147.1 DNA-binding protein WhiA -
  BSR08_RS14675 (BSR08_14875) mgfK 2711530..2712483 (-) 954 WP_003244450.1 gluconeogenesis morphogenetic factor -
  BSR08_RS14680 (BSR08_14880) rapZ 2712485..2713372 (-) 888 WP_003243903.1 RNase adapter RapZ -
  BSR08_RS14685 (BSR08_14885) rppI 2713397..2713873 (-) 477 WP_014481002.1 NUDIX domain-containing protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27541.46 Da        Isoelectric Point: 4.6774

>NTDB_id=173416 BSR08_RS14650 WP_014481000.1 2708407..2709120(-) (braR) [Bacillus subtilis strain KH2]
MYRILLVEDDERIASLLGGHLQKYGYEVKIAEQLNDIKLEFAEMKPDLVLLDINLPFFDGFYWCRQIRTISNAPIIFISA
RIDELNQVMAIENGGDDYITKPFHLEVVMAKIKSVLRRTYGEYSPSLPQESRIVELGGLTIYPDQNEAEWNSSRILFSQK
EFQLLSIFVREHKKIVSRDELLEALWDDVDFVDDNTLTVNVNRLRRKLENAGLKDCISTIRGQGYQFQVNRKDEAEC

Nucleotide


Download         Length: 714 bp        

>NTDB_id=173416 BSR08_RS14650 WP_014481000.1 2708407..2709120(-) (braR) [Bacillus subtilis strain KH2]
GTGTATCGGATTTTGCTTGTGGAAGATGATGAGCGGATTGCTTCTTTGCTGGGCGGTCATCTTCAAAAATACGGATATGA
AGTGAAAATTGCTGAACAGCTGAATGATATAAAATTGGAATTTGCAGAAATGAAGCCTGATCTTGTGCTGCTTGATATCA
ACCTGCCTTTTTTTGACGGATTTTATTGGTGCAGGCAAATCCGTACCATTTCCAATGCGCCGATTATCTTTATATCGGCA
CGGATCGATGAGCTGAATCAGGTAATGGCGATTGAAAATGGCGGCGATGATTATATCACAAAGCCGTTCCATCTAGAGGT
AGTGATGGCCAAAATCAAAAGCGTCCTGCGCCGCACATATGGTGAATATTCGCCCTCTTTGCCGCAGGAATCTAGAATAG
TGGAGCTTGGTGGGCTGACGATTTATCCTGATCAAAATGAGGCCGAATGGAACAGCTCCCGTATTCTGTTTTCCCAAAAA
GAATTTCAGCTTCTCTCTATTTTTGTGAGGGAGCATAAAAAAATTGTTTCTCGTGATGAACTATTGGAGGCGTTATGGGA
TGACGTTGATTTTGTCGATGACAATACGTTAACGGTCAATGTCAACCGGCTGCGGAGAAAACTGGAGAATGCCGGACTGA
AAGATTGCATTTCCACAATCAGAGGACAAGGCTATCAATTTCAAGTCAATCGGAAGGATGAAGCGGAGTGTTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(155-227)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

45.982

94.515

0.435

Multiple sequence alignment