Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   A0O21_RS06910 Genome accession   NZ_CP014699
Coordinates   1508435..1509520 (-) Length   361 a.a.
NCBI ID   WP_067063446.1    Uniprot ID   A0A172Q8Q3
Organism   Streptococcus pantholopis strain TA 26     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1503435..1514520
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A0O21_RS06885 (A0O21_06885) - 1503922..1504452 (-) 531 WP_067063432.1 VanZ family protein -
  A0O21_RS06890 (A0O21_06890) rlmN 1504449..1505528 (-) 1080 WP_067063434.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  A0O21_RS06895 (A0O21_06895) - 1505532..1506119 (-) 588 WP_067063436.1 YutD family protein -
  A0O21_RS06900 (A0O21_06900) - 1506586..1507950 (-) 1365 WP_067063439.1 bifunctional metallophosphatase/5'-nucleotidase -
  A0O21_RS06905 (A0O21_06905) - 1508053..1508301 (-) 249 WP_067063443.1 DUF3923 family protein -
  A0O21_RS06910 (A0O21_06910) sepM 1508435..1509520 (-) 1086 WP_067063446.1 SepM family pheromone-processing serine protease Regulator
  A0O21_RS06915 (A0O21_06915) coaD 1509498..1509998 (-) 501 WP_067063450.1 pantetheine-phosphate adenylyltransferase -
  A0O21_RS06920 (A0O21_06920) rsmD 1509988..1510527 (-) 540 WP_067063453.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  A0O21_RS06925 (A0O21_06925) asnA 1510737..1511729 (-) 993 WP_067063455.1 aspartate--ammonia ligase -
  A0O21_RS06930 (A0O21_06930) - 1512421..1513506 (-) 1086 WP_067063458.1 MmcQ/YjbR family DNA-binding protein -
  A0O21_RS06935 (A0O21_06935) - 1513638..1514519 (+) 882 WP_067065212.1 sulfite exporter TauE/SafE family protein -

Sequence


Protein


Download         Length: 361 a.a.        Molecular weight: 39313.35 Da        Isoelectric Point: 4.2021

>NTDB_id=173360 A0O21_RS06910 WP_067063446.1 1508435..1509520(-) (sepM) [Streptococcus pantholopis strain TA 26]
MKILQVFSSNLKALRQWIKQFKWWLIGALAAFLLLFSLFVPLPYYLEMPGGAYDIRSVLTVDDRKDDQEGSYNFVAVSMS
QATLAQLIYGWLTPFTEITSMQETTGGYSNDDYIRMNQFYMETSQNNAVYQALSLAGEEVSLDYMGVYVLNVNENSSFKG
ILQLADTVTGVNSRTFSSSADLIDYVSGLELGEPVTVQYTSDGKAKEAEGKIIRLENGKNGIGIGLVDHTEVNSDKDIVF
STDGVGGPSAGLMFTLDIYDQLTEEDLRQGRVIAGTGTIEKDGSVGDIGGAALKVVAADKAGAEIFFVPNNPVDEAVLKA
DPAAKTNYEEAAAAAKELGSKMKIVPVTNVQEAIDYLRKQD

Nucleotide


Download         Length: 1086 bp        

>NTDB_id=173360 A0O21_RS06910 WP_067063446.1 1508435..1509520(-) (sepM) [Streptococcus pantholopis strain TA 26]
GTGAAGATTTTACAAGTCTTTAGTTCAAATCTAAAAGCACTGAGACAGTGGATCAAGCAGTTTAAGTGGTGGCTAATCGG
TGCTCTGGCAGCGTTTTTGCTGCTTTTTAGCCTTTTTGTACCGCTTCCCTATTATTTAGAGATGCCGGGCGGTGCTTATG
ACATTCGTTCGGTTTTGACAGTTGATGACCGGAAAGATGATCAGGAGGGTTCCTATAATTTTGTGGCTGTCAGTATGAGT
CAGGCCACTCTGGCCCAGCTGATTTACGGCTGGCTGACCCCCTTCACTGAAATTACCAGTATGCAGGAGACAACCGGGGG
CTACAGTAATGATGATTATATCAGAATGAATCAGTTTTACATGGAAACCTCACAGAATAATGCTGTTTATCAGGCTCTCA
GTTTGGCCGGTGAAGAAGTCAGTCTTGACTATATGGGGGTCTATGTCCTTAATGTCAATGAAAACTCCAGTTTTAAAGGA
ATCCTTCAGCTGGCTGATACAGTCACAGGCGTTAACAGCCGGACTTTTAGCAGCTCTGCCGACCTTATTGACTATGTTAG
CGGCCTGGAATTGGGGGAACCGGTAACCGTTCAGTATACATCTGATGGCAAGGCTAAAGAGGCAGAAGGAAAAATCATCA
GGCTGGAAAATGGGAAAAATGGTATTGGCATTGGTCTGGTCGATCATACAGAAGTTAATTCGGATAAGGATATTGTTTTT
TCAACGGATGGTGTCGGAGGTCCCAGTGCTGGCTTAATGTTTACCTTAGATATTTATGACCAGCTGACTGAGGAGGATCT
GCGGCAGGGACGTGTGATTGCCGGAACTGGAACAATTGAAAAGGATGGCTCAGTCGGTGATATCGGCGGCGCTGCTTTGA
AGGTTGTTGCAGCGGATAAGGCTGGAGCAGAGATCTTCTTTGTTCCTAATAACCCTGTAGATGAAGCTGTTTTAAAAGCT
GACCCAGCTGCTAAAACGAATTATGAAGAAGCTGCAGCAGCAGCTAAAGAGCTGGGCAGCAAGATGAAGATTGTTCCTGT
GACCAATGTTCAGGAAGCTATCGATTATTTAAGAAAGCAGGATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A172Q8Q3

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

70.468

94.737

0.668


Multiple sequence alignment