Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | BSF20_RS18050 | Genome accession | NZ_CP018152 |
| Coordinates | 3608881..3609243 (-) | Length | 120 a.a. |
| NCBI ID | WP_003154238.1 | Uniprot ID | A0A150FA43 |
| Organism | Bacillus amyloliquefaciens strain LM2303 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 3603881..3614243
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BSF20_RS18025 (BSF20_17665) | flhB | 3605406..3606485 (-) | 1080 | WP_003154232.1 | flagellar biosynthesis protein FlhB | - |
| BSF20_RS18030 (BSF20_17670) | fliR | 3606485..3607264 (-) | 780 | WP_003154233.1 | flagellar biosynthetic protein FliR | - |
| BSF20_RS18035 (BSF20_17675) | fliQ | 3607271..3607540 (-) | 270 | WP_003154234.1 | flagellar biosynthesis protein FliQ | - |
| BSF20_RS18040 (BSF20_17680) | fliP | 3607555..3608220 (-) | 666 | WP_003154235.1 | flagellar type III secretion system pore protein FliP | - |
| BSF20_RS18045 (BSF20_17685) | fliZ | 3608213..3608866 (-) | 654 | WP_003154237.1 | flagella biosynthesis regulatory protein FliZ | - |
| BSF20_RS18050 (BSF20_17690) | pilH | 3608881..3609243 (-) | 363 | WP_003154238.1 | chemotaxis protein CheY | Machinery gene |
| BSF20_RS18055 (BSF20_17695) | fliY | 3609270..3610406 (-) | 1137 | WP_003154239.1 | flagellar motor switch phosphatase FliY | - |
| BSF20_RS18060 (BSF20_17700) | fliM | 3610396..3611394 (-) | 999 | WP_003154240.1 | flagellar motor switch protein FliM | - |
| BSF20_RS18065 (BSF20_17705) | fliL | 3611428..3611847 (-) | 420 | WP_003154241.1 | flagellar basal body-associated protein FliL | - |
| BSF20_RS18070 (BSF20_17710) | - | 3611844..3612059 (-) | 216 | WP_003154243.1 | flagellar FlbD family protein | - |
| BSF20_RS18075 (BSF20_17715) | flgG | 3612099..3612875 (-) | 777 | WP_003154244.1 | flagellar basal body rod protein FlgG | - |
| BSF20_RS18080 (BSF20_17720) | flgD | 3612900..3613340 (-) | 441 | WP_003154247.1 | flagellar hook assembly protein FlgD | - |
Sequence
Protein
Download Length: 120 a.a. Molecular weight: 13209.53 Da Isoelectric Point: 4.6805
>NTDB_id=173299 BSF20_RS18050 WP_003154238.1 3608881..3609243(-) (pilH) [Bacillus amyloliquefaciens strain LM2303]
MAHRILIVDDAAFMRMMIKDILVKNGFDVVAEASDGAQAVEKFKEHSPDLVTMDITMPEMDGITALKEIKQIDPQAKIIM
CSAMGQQSMVIDAIQAGAKDFIVKPFQADRVLEAINKTLS
MAHRILIVDDAAFMRMMIKDILVKNGFDVVAEASDGAQAVEKFKEHSPDLVTMDITMPEMDGITALKEIKQIDPQAKIIM
CSAMGQQSMVIDAIQAGAKDFIVKPFQADRVLEAINKTLS
Nucleotide
Download Length: 363 bp
>NTDB_id=173299 BSF20_RS18050 WP_003154238.1 3608881..3609243(-) (pilH) [Bacillus amyloliquefaciens strain LM2303]
ATGGCACACAGAATTTTAATTGTAGACGATGCAGCATTTATGAGAATGATGATCAAGGATATTTTAGTGAAGAACGGTTT
TGACGTTGTAGCTGAAGCTTCAGACGGAGCGCAGGCAGTTGAAAAATTCAAAGAGCATTCCCCCGACCTAGTGACAATGG
ATATTACAATGCCTGAAATGGACGGGATTACAGCTCTAAAGGAAATTAAACAGATCGATCCGCAGGCGAAAATCATCATG
TGTTCGGCTATGGGCCAGCAGTCAATGGTTATTGACGCGATTCAGGCCGGCGCAAAAGACTTTATCGTGAAACCGTTCCA
AGCGGACCGCGTGCTTGAAGCCATTAATAAAACATTAAGCTAA
ATGGCACACAGAATTTTAATTGTAGACGATGCAGCATTTATGAGAATGATGATCAAGGATATTTTAGTGAAGAACGGTTT
TGACGTTGTAGCTGAAGCTTCAGACGGAGCGCAGGCAGTTGAAAAATTCAAAGAGCATTCCCCCGACCTAGTGACAATGG
ATATTACAATGCCTGAAATGGACGGGATTACAGCTCTAAAGGAAATTAAACAGATCGATCCGCAGGCGAAAATCATCATG
TGTTCGGCTATGGGCCAGCAGTCAATGGTTATTGACGCGATTCAGGCCGGCGCAAAAGACTTTATCGTGAAACCGTTCCA
AGCGGACCGCGTGCTTGAAGCCATTAATAAAACATTAAGCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
38.983 |
98.333 |
0.383 |