Detailed information NTG0173186

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: PG2T_RS05415
• Genome accession: NZ_CP014671
• Coordinates: 1139272..1140222 (-)
• Length: 316 a.a.
• NCBI ID: WP_068803263.1
• Uniprot ID: A0A1B1YS43
• Organism: Immundisolibacter cernigliae strain TR3.2
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1134272..1145222

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PG2T_RS05385 (PG2T_05395)	-	1134497..1134904 (-)	408	WP_145931008.1	VanZ family protein	-
PG2T_RS05390 (PG2T_05400)	-	1134932..1135276 (-)	345	WP_068803257.1	histidine triad nucleotide-binding protein	-
PG2T_RS05395 (PG2T_05405)	-	1135292..1136665 (-)	1374	WP_068803259.1	Rieske 2Fe-2S domain-containing protein	-
PG2T_RS05400 (PG2T_05410)	-	1136830..1137627 (+)	798	WP_068803260.1	ZIP family metal transporter	-
PG2T_RS05405 (PG2T_05415)	ftsX	1137693..1138607 (-)	915	WP_068803261.1	permease-like cell division protein FtsX	-
PG2T_RS05410 (PG2T_05420)	ftsE	1138616..1139275 (-)	660	WP_068803262.1	cell division ATP-binding protein FtsE	-
PG2T_RS05415 (PG2T_05425)	pilA	1139272..1140222 (-)	951	WP_068803263.1	signal recognition particle-docking protein FtsY	Machinery gene
PG2T_RS05420 (PG2T_05430)	-	1140341..1141741 (+)	1401	WP_202816436.1	M16 family metallopeptidase	-
PG2T_RS05425 (PG2T_05435)	-	1141725..1143122 (+)	1398	WP_083214789.1	M16 family metallopeptidase	-
PG2T_RS05430 (PG2T_05440)	rsmD	1143119..1143688 (+)	570	WP_068803264.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
PG2T_RS05435 (PG2T_05445)	coaD	1143767..1144249 (+)	483	WP_068803265.1	pantetheine-phosphate adenylyltransferase	-

Sequence

Protein

• Length: 316 a.a.
• Molecular weight: 33307.38 Da
• Isoelectric Point: 6.5079

>NTDB_id=173186 PG2T_RS05415 WP_068803263.1 1139272..1140222(-) (pilA) [Immundisolibacter cernigliae strain TR3.2]
MTDSSRPGLFARLRQGLSRTRERLGGGIADLVLGRRSIDALTVEEIETLLLGADAGVEATTALVDDLNDRLARHELADGE
AVLAALKERMLKLLAPCEVPAPVFTARPHVILMAGVNGAGKTTTIGKLAQRLKSEGKQVVLAAGDTFRAAAVEQLKVWGE
RLGVPVISQQPGADPAAVIYDALLAARSRGADVVIADTSGRLHTQAGLMDELRKIRRVMGKFDPAAPHETLLVLDAGNGQ
NALVQARQFNEAIGVTGLVLTKLDGTAKGGVVLAIASQLGLPIRFIGVGEKADDLRPFVAQDFVEALLSRDTDSPA

Nucleotide

• Length: 951 bp

>NTDB_id=173186 PG2T_RS05415 WP_068803263.1 1139272..1140222(-) (pilA) [Immundisolibacter cernigliae strain TR3.2]
ATGACCGACTCATCCCGGCCGGGCCTGTTCGCCCGCCTGCGTCAGGGCCTCTCGCGCACCCGCGAACGCCTGGGCGGCGG
CATTGCCGACCTGGTGCTCGGCCGGCGCAGCATCGACGCCCTCACGGTCGAGGAAATCGAAACCCTGTTGCTGGGCGCCG
ACGCCGGCGTCGAGGCCACCACGGCGCTGGTCGACGACCTGAACGACCGCCTGGCGCGCCACGAACTGGCCGACGGCGAG
GCCGTGCTGGCGGCGCTCAAGGAACGCATGCTCAAGCTGCTGGCCCCGTGCGAGGTGCCGGCACCGGTCTTCACTGCGCG
CCCGCACGTCATCCTCATGGCCGGCGTCAACGGCGCCGGCAAGACCACCACCATCGGCAAACTGGCGCAGCGCCTGAAGT
CCGAGGGCAAGCAGGTGGTGCTGGCGGCCGGCGACACCTTTCGCGCCGCCGCCGTCGAGCAGCTCAAGGTGTGGGGCGAG
CGCCTGGGCGTGCCGGTGATTTCCCAGCAGCCGGGCGCCGATCCGGCGGCCGTGATCTACGACGCGCTGCTGGCGGCGCG
CAGCCGCGGTGCCGACGTGGTGATCGCCGACACCTCCGGACGCCTGCACACGCAGGCCGGGCTGATGGACGAGCTGCGCA
AGATCCGCCGCGTGATGGGCAAGTTCGACCCCGCCGCGCCGCACGAAACGCTGCTGGTGCTCGACGCCGGCAACGGCCAG
AACGCCCTGGTGCAGGCGCGCCAGTTCAACGAGGCGATCGGCGTCACCGGCCTCGTGCTGACCAAGCTCGACGGCACCGC
CAAGGGCGGGGTGGTGCTGGCCATCGCCAGTCAGCTGGGCCTGCCGATCCGCTTCATCGGCGTCGGCGAGAAGGCCGACG
ATCTGCGCCCGTTCGTGGCCCAGGATTTCGTCGAGGCGCTGCTGAGTCGGGATACCGACAGCCCCGCATGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (108-308)

• SRP54-type protein, helical bundle domain (SRP54_N) (24-90)

3D structure

• AlphaFold DB: A0A1B1YS43

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	51.948	97.468	0.506