Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | BKJ37_RS12685 | Genome accession | NZ_CP018143 |
| Coordinates | 2631088..2633667 (-) | Length | 859 a.a. |
| NCBI ID | WP_001210050.1 | Uniprot ID | V5VGK1 |
| Organism | Acinetobacter baumannii strain HRAB-85 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2626088..2638667
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BKJ37_RS12665 (BKJ37_12480) | - | 2627045..2627389 (-) | 345 | WP_000654268.1 | hypothetical protein | - |
| BKJ37_RS12670 (BKJ37_12485) | rlmKL | 2627628..2629832 (+) | 2205 | WP_001098013.1 | bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL | - |
| BKJ37_RS12675 (BKJ37_12490) | - | 2629858..2630274 (-) | 417 | WP_001060738.1 | hypothetical protein | - |
| BKJ37_RS12680 (BKJ37_12495) | - | 2630543..2631031 (+) | 489 | WP_000941316.1 | CinA family protein | - |
| BKJ37_RS12685 (BKJ37_12500) | clpC | 2631088..2633667 (-) | 2580 | WP_001210050.1 | ATP-dependent chaperone ClpB | Regulator |
| BKJ37_RS12690 (BKJ37_12505) | - | 2633969..2634775 (+) | 807 | WP_001237344.1 | peptidoglycan DD-metalloendopeptidase family protein | - |
| BKJ37_RS12695 (BKJ37_12510) | - | 2634772..2635197 (-) | 426 | WP_001026230.1 | GNAT family N-acetyltransferase | - |
| BKJ37_RS12700 (BKJ37_12515) | - | 2635289..2635711 (-) | 423 | WP_001195082.1 | OsmC family protein | - |
| BKJ37_RS20650 | - | 2635790..2635909 (-) | 120 | Protein_2464 | hypothetical protein | - |
| BKJ37_RS12705 (BKJ37_12520) | crp | 2636150..2636815 (+) | 666 | WP_000203219.1 | cAMP-activated global transcriptional regulator CRP | Regulator |
| BKJ37_RS20145 | - | 2636872..2637962 (+) | 1091 | WP_085940413.1 | IS4-like element ISAba1 family transposase | - |
Sequence
Protein
Download Length: 859 a.a. Molecular weight: 95142.36 Da Isoelectric Point: 4.9733
>NTDB_id=173136 BKJ37_RS12685 WP_001210050.1 2631088..2633667(-) (clpC) [Acinetobacter baumannii strain HRAB-85]
MRFEKFTNRLQQALSDAQSLAMGKDHTAIAGIHILSTLLEEPSNISLLQQAGARLPELKQKLEQALKDAPTIANPTGDVN
LNPEAVKALNLADRYAQKAGDEFLSTDWVLLGLAETGETKNILSAVGVTPDSLRKVIENIRGSDKVMSNNHEDQRDSLNK
YTIDLTERALSGKLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDLG
SLLAGAKYRGEFEERLKAVLKDLAKHEGEIILFIDELHTLVGAGKGDGAMDAGNMLKPALARGELRCVGATTLDEYRQYI
EKDAALERRFQKVLVDEPSVEDTIAILRGLKEKYATHHGVQILDSAIIAAAKMSHRYITDRQLPDKAIDLIDEAASRIKM
EIDSKPEALDKLDRRLIQLKMQLEAVKKDEDAGSKAEVTHLEKQIAEVEKEYNDLEEVWKAEKTLVEGTKQAQVELDKAR
IAFEKAQREGDLAEAARLQYGVIPELQKQLEQDEVAEENEEPKLIRTKVTENEIAEVVSAATGIPVAKMMQGEREKLLHM
EEFLHDRVVGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELTKALANFLFDSDDAMIRIDMSEFMEKHS
VSRLVGAPPGYVGYEEGGVLTEAVRRKPYSVVLFDEVEKAHPDVFNILLQVLDDGRLTDSQGRVVDFKNTVIVMTSNLGS
QDVRELGEGATDDEVRTIVMNAVSQHFRPEFINRIDELVIFHSLKKAQIRGIADIQLDRLRSRLVDRDMSLTVDDSAFDL
LIDAGFDPVYGARPLKRAIQQQVENTLAQKILSGDFVAGDTILVKGENGHLVFDKLKLS
MRFEKFTNRLQQALSDAQSLAMGKDHTAIAGIHILSTLLEEPSNISLLQQAGARLPELKQKLEQALKDAPTIANPTGDVN
LNPEAVKALNLADRYAQKAGDEFLSTDWVLLGLAETGETKNILSAVGVTPDSLRKVIENIRGSDKVMSNNHEDQRDSLNK
YTIDLTERALSGKLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDLG
SLLAGAKYRGEFEERLKAVLKDLAKHEGEIILFIDELHTLVGAGKGDGAMDAGNMLKPALARGELRCVGATTLDEYRQYI
EKDAALERRFQKVLVDEPSVEDTIAILRGLKEKYATHHGVQILDSAIIAAAKMSHRYITDRQLPDKAIDLIDEAASRIKM
EIDSKPEALDKLDRRLIQLKMQLEAVKKDEDAGSKAEVTHLEKQIAEVEKEYNDLEEVWKAEKTLVEGTKQAQVELDKAR
IAFEKAQREGDLAEAARLQYGVIPELQKQLEQDEVAEENEEPKLIRTKVTENEIAEVVSAATGIPVAKMMQGEREKLLHM
EEFLHDRVVGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELTKALANFLFDSDDAMIRIDMSEFMEKHS
VSRLVGAPPGYVGYEEGGVLTEAVRRKPYSVVLFDEVEKAHPDVFNILLQVLDDGRLTDSQGRVVDFKNTVIVMTSNLGS
QDVRELGEGATDDEVRTIVMNAVSQHFRPEFINRIDELVIFHSLKKAQIRGIADIQLDRLRSRLVDRDMSLTVDDSAFDL
LIDAGFDPVYGARPLKRAIQQQVENTLAQKILSGDFVAGDTILVKGENGHLVFDKLKLS
Nucleotide
Download Length: 2580 bp
>NTDB_id=173136 BKJ37_RS12685 WP_001210050.1 2631088..2633667(-) (clpC) [Acinetobacter baumannii strain HRAB-85]
ATGCGATTTGAAAAATTTACGAACCGCTTGCAGCAAGCCCTCTCAGATGCTCAATCCTTAGCGATGGGTAAAGACCATAC
AGCTATAGCAGGTATTCATATTTTGAGTACTTTATTGGAAGAGCCGTCCAATATTAGTTTGTTGCAACAAGCAGGTGCAC
GGTTACCTGAACTTAAACAAAAGCTAGAGCAGGCTTTAAAAGATGCTCCGACTATTGCTAACCCGACGGGCGATGTCAAT
TTAAACCCAGAAGCAGTTAAAGCACTCAACTTGGCAGATCGATACGCGCAAAAAGCTGGCGATGAATTTTTGTCAACTGA
CTGGGTTTTATTGGGCTTGGCAGAAACTGGTGAAACAAAAAATATTTTAAGTGCCGTAGGTGTAACTCCCGACAGCTTAC
GCAAAGTAATTGAAAATATTCGAGGTAGTGACAAAGTCATGAGTAATAATCACGAAGACCAACGTGACTCACTTAATAAA
TATACGATTGATTTAACCGAGCGGGCTTTATCGGGGAAACTTGATCCGGTGATTGGACGTGATGATGAGATCCGCCGTAC
CATTCAGGTCTTGTCACGCCGTACTAAAAATAACCCAGTACTCATCGGTGAACCTGGGGTAGGTAAAACCGCTATTGTTG
AAGGTTTGGCACAACGTATTGTTAATGGTGAAGTACCAGAAGGCTTAAAGAATAAACGTGTTTTATCGTTAGATTTAGGT
TCATTGCTTGCAGGTGCTAAGTATCGTGGTGAGTTTGAAGAACGTTTAAAAGCTGTTTTAAAAGATTTGGCGAAACACGA
AGGCGAAATCATCTTATTCATTGACGAGCTACATACGCTCGTTGGTGCTGGTAAAGGTGACGGCGCGATGGATGCAGGTA
ATATGTTAAAACCTGCGTTGGCTCGTGGTGAGTTGCGCTGTGTGGGTGCAACTACCTTAGATGAATATCGCCAATACATT
GAAAAAGACGCAGCCTTGGAGCGTCGTTTCCAAAAAGTGCTGGTCGATGAACCAAGTGTAGAAGATACCATTGCGATTTT
ACGTGGTCTGAAAGAAAAGTATGCGACTCACCATGGCGTACAGATTTTAGATTCAGCGATTATTGCTGCGGCGAAAATGT
CTCATCGTTATATTACAGATCGTCAATTACCGGACAAGGCGATTGACTTGATTGATGAGGCAGCTTCTCGTATTAAGATG
GAAATCGATTCTAAGCCAGAAGCACTTGATAAACTTGACCGCCGTTTAATCCAGTTGAAAATGCAATTGGAAGCGGTGAA
AAAAGATGAAGACGCAGGCAGTAAGGCCGAAGTTACTCATCTTGAAAAACAGATTGCTGAAGTCGAGAAAGAATACAACG
ATCTGGAAGAAGTGTGGAAAGCTGAGAAAACATTGGTAGAAGGCACTAAACAAGCTCAGGTTGAACTTGATAAAGCACGT
ATTGCTTTTGAAAAAGCTCAGCGCGAAGGCGATTTGGCAGAAGCAGCACGTTTGCAATATGGTGTAATTCCAGAGTTGCA
AAAACAACTTGAACAAGATGAAGTTGCTGAAGAAAACGAAGAGCCAAAACTCATTCGTACAAAAGTAACTGAAAATGAAA
TTGCCGAAGTCGTTAGTGCTGCAACAGGTATTCCGGTTGCTAAAATGATGCAAGGCGAGCGTGAAAAACTTCTTCATATG
GAAGAGTTTTTACATGACCGTGTTGTTGGGCAAGATGAAGCAGTTGTTGCGGTATCGAATGCAGTTCGTCGTTCACGTGC
CGGTTTGTCTGACCCGAATCGTCCTAGCGGATCATTCTTGTTCTTAGGACCAACAGGTGTAGGTAAAACTGAGTTAACTA
AAGCTTTAGCTAACTTCTTGTTTGACAGTGATGATGCCATGATTCGTATCGATATGAGTGAATTCATGGAGAAACATTCT
GTCAGCCGTTTAGTTGGTGCGCCTCCGGGTTACGTAGGTTACGAAGAGGGCGGTGTTTTAACCGAAGCTGTTCGCCGTAA
ACCATATAGCGTAGTGTTGTTTGATGAGGTTGAAAAAGCGCATCCAGATGTCTTCAATATCTTGCTACAAGTGTTAGACG
ATGGACGCTTAACCGACTCACAAGGTCGTGTAGTGGACTTTAAAAACACGGTTATTGTGATGACATCGAACTTGGGTTCA
CAAGATGTACGTGAACTTGGTGAAGGTGCAACTGATGATGAAGTGCGTACTATTGTAATGAATGCGGTAAGTCAGCATTT
CCGTCCGGAGTTTATTAACCGGATTGATGAGTTGGTGATTTTCCATTCACTCAAAAAAGCACAGATTCGTGGCATTGCCG
ATATTCAGTTGGACCGCTTACGCTCACGACTTGTTGATCGTGATATGAGTTTAACTGTAGATGACAGTGCATTTGACTTA
TTGATTGACGCTGGTTTTGATCCTGTATACGGAGCGCGTCCATTGAAACGTGCAATTCAACAACAGGTTGAAAATACACT
AGCTCAAAAAATCTTGTCAGGTGACTTTGTTGCGGGTGATACCATTTTAGTTAAAGGCGAAAATGGTCACTTAGTGTTTG
ATAAGCTGAAACTCAGCTAA
ATGCGATTTGAAAAATTTACGAACCGCTTGCAGCAAGCCCTCTCAGATGCTCAATCCTTAGCGATGGGTAAAGACCATAC
AGCTATAGCAGGTATTCATATTTTGAGTACTTTATTGGAAGAGCCGTCCAATATTAGTTTGTTGCAACAAGCAGGTGCAC
GGTTACCTGAACTTAAACAAAAGCTAGAGCAGGCTTTAAAAGATGCTCCGACTATTGCTAACCCGACGGGCGATGTCAAT
TTAAACCCAGAAGCAGTTAAAGCACTCAACTTGGCAGATCGATACGCGCAAAAAGCTGGCGATGAATTTTTGTCAACTGA
CTGGGTTTTATTGGGCTTGGCAGAAACTGGTGAAACAAAAAATATTTTAAGTGCCGTAGGTGTAACTCCCGACAGCTTAC
GCAAAGTAATTGAAAATATTCGAGGTAGTGACAAAGTCATGAGTAATAATCACGAAGACCAACGTGACTCACTTAATAAA
TATACGATTGATTTAACCGAGCGGGCTTTATCGGGGAAACTTGATCCGGTGATTGGACGTGATGATGAGATCCGCCGTAC
CATTCAGGTCTTGTCACGCCGTACTAAAAATAACCCAGTACTCATCGGTGAACCTGGGGTAGGTAAAACCGCTATTGTTG
AAGGTTTGGCACAACGTATTGTTAATGGTGAAGTACCAGAAGGCTTAAAGAATAAACGTGTTTTATCGTTAGATTTAGGT
TCATTGCTTGCAGGTGCTAAGTATCGTGGTGAGTTTGAAGAACGTTTAAAAGCTGTTTTAAAAGATTTGGCGAAACACGA
AGGCGAAATCATCTTATTCATTGACGAGCTACATACGCTCGTTGGTGCTGGTAAAGGTGACGGCGCGATGGATGCAGGTA
ATATGTTAAAACCTGCGTTGGCTCGTGGTGAGTTGCGCTGTGTGGGTGCAACTACCTTAGATGAATATCGCCAATACATT
GAAAAAGACGCAGCCTTGGAGCGTCGTTTCCAAAAAGTGCTGGTCGATGAACCAAGTGTAGAAGATACCATTGCGATTTT
ACGTGGTCTGAAAGAAAAGTATGCGACTCACCATGGCGTACAGATTTTAGATTCAGCGATTATTGCTGCGGCGAAAATGT
CTCATCGTTATATTACAGATCGTCAATTACCGGACAAGGCGATTGACTTGATTGATGAGGCAGCTTCTCGTATTAAGATG
GAAATCGATTCTAAGCCAGAAGCACTTGATAAACTTGACCGCCGTTTAATCCAGTTGAAAATGCAATTGGAAGCGGTGAA
AAAAGATGAAGACGCAGGCAGTAAGGCCGAAGTTACTCATCTTGAAAAACAGATTGCTGAAGTCGAGAAAGAATACAACG
ATCTGGAAGAAGTGTGGAAAGCTGAGAAAACATTGGTAGAAGGCACTAAACAAGCTCAGGTTGAACTTGATAAAGCACGT
ATTGCTTTTGAAAAAGCTCAGCGCGAAGGCGATTTGGCAGAAGCAGCACGTTTGCAATATGGTGTAATTCCAGAGTTGCA
AAAACAACTTGAACAAGATGAAGTTGCTGAAGAAAACGAAGAGCCAAAACTCATTCGTACAAAAGTAACTGAAAATGAAA
TTGCCGAAGTCGTTAGTGCTGCAACAGGTATTCCGGTTGCTAAAATGATGCAAGGCGAGCGTGAAAAACTTCTTCATATG
GAAGAGTTTTTACATGACCGTGTTGTTGGGCAAGATGAAGCAGTTGTTGCGGTATCGAATGCAGTTCGTCGTTCACGTGC
CGGTTTGTCTGACCCGAATCGTCCTAGCGGATCATTCTTGTTCTTAGGACCAACAGGTGTAGGTAAAACTGAGTTAACTA
AAGCTTTAGCTAACTTCTTGTTTGACAGTGATGATGCCATGATTCGTATCGATATGAGTGAATTCATGGAGAAACATTCT
GTCAGCCGTTTAGTTGGTGCGCCTCCGGGTTACGTAGGTTACGAAGAGGGCGGTGTTTTAACCGAAGCTGTTCGCCGTAA
ACCATATAGCGTAGTGTTGTTTGATGAGGTTGAAAAAGCGCATCCAGATGTCTTCAATATCTTGCTACAAGTGTTAGACG
ATGGACGCTTAACCGACTCACAAGGTCGTGTAGTGGACTTTAAAAACACGGTTATTGTGATGACATCGAACTTGGGTTCA
CAAGATGTACGTGAACTTGGTGAAGGTGCAACTGATGATGAAGTGCGTACTATTGTAATGAATGCGGTAAGTCAGCATTT
CCGTCCGGAGTTTATTAACCGGATTGATGAGTTGGTGATTTTCCATTCACTCAAAAAAGCACAGATTCGTGGCATTGCCG
ATATTCAGTTGGACCGCTTACGCTCACGACTTGTTGATCGTGATATGAGTTTAACTGTAGATGACAGTGCATTTGACTTA
TTGATTGACGCTGGTTTTGATCCTGTATACGGAGCGCGTCCATTGAAACGTGCAATTCAACAACAGGTTGAAAATACACT
AGCTCAAAAAATCTTGTCAGGTGACTTTGTTGCGGGTGATACCATTTTAGTTAAAGGCGAAAATGGTCACTTAGTGTTTG
ATAAGCTGAAACTCAGCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
46.774 |
100 |
0.473 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
43.052 |
100 |
0.44 |
| clpC | Streptococcus pneumoniae TIGR4 |
46.601 |
82.189 |
0.383 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
48.886 |
78.347 |
0.383 |
| clpE | Streptococcus mutans UA159 |
46.866 |
81.723 |
0.383 |
| clpC | Streptococcus pneumoniae D39 |
46.459 |
82.189 |
0.382 |
| clpC | Streptococcus pneumoniae Rx1 |
46.459 |
82.189 |
0.382 |
| clpE | Streptococcus pneumoniae TIGR4 |
48.012 |
79.045 |
0.38 |
| clpE | Streptococcus pneumoniae Rx1 |
48.012 |
79.045 |
0.38 |
| clpE | Streptococcus pneumoniae D39 |
48.012 |
79.045 |
0.38 |
| clpE | Streptococcus pneumoniae R6 |
48.012 |
79.045 |
0.38 |