Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   AC731_RS12705 Genome accession   NZ_CP014646
Coordinates   2705579..2705968 (+) Length   129 a.a.
NCBI ID   WP_004291748.1    Uniprot ID   A0A127K6Y0
Organism   Thauera humireducens strain SgZ-1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2700579..2710968
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AC731_RS12685 (AC731_012685) hemL 2702340..2703623 (-) 1284 WP_004291741.1 glutamate-1-semialdehyde 2,1-aminomutase -
  AC731_RS12690 (AC731_012690) thiE 2703730..2704368 (-) 639 WP_237266532.1 thiamine phosphate synthase -
  AC731_RS12695 (AC731_012695) thiD 2704373..2705230 (-) 858 WP_048706596.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  AC731_RS12700 (AC731_012700) - 2705345..2705497 (+) 153 WP_004291746.1 rubredoxin -
  AC731_RS12705 (AC731_012705) pilG 2705579..2705968 (+) 390 WP_004291748.1 response regulator Regulator
  AC731_RS12710 (AC731_012710) - 2705995..2706360 (+) 366 WP_004291750.1 response regulator -
  AC731_RS12715 (AC731_012715) - 2706368..2706877 (+) 510 WP_004291752.1 chemotaxis protein CheW -
  AC731_RS12720 (AC731_012720) - 2706932..2709070 (+) 2139 WP_004291754.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 129 a.a.        Molecular weight: 14118.29 Da        Isoelectric Point: 7.1342

>NTDB_id=172972 AC731_RS12705 WP_004291748.1 2705579..2705968(+) (pilG) [Thauera humireducens strain SgZ-1]
MDLAGLKVMVIDDSNTIRRSAEIFLGQSGCQVLLAEDGFDALAKIADHNPDVIFVDIMMPRLDGYQTCALIKKNPRLAST
PVIMLSSRDGLFDRARGRMVGSDEYLTKPFTKDSLLKAVAQHSGRSSTT

Nucleotide


Download         Length: 390 bp        

>NTDB_id=172972 AC731_RS12705 WP_004291748.1 2705579..2705968(+) (pilG) [Thauera humireducens strain SgZ-1]
ATGGACCTTGCCGGACTGAAGGTGATGGTCATCGATGACAGCAACACGATTCGCCGCAGCGCAGAGATCTTTCTCGGCCA
GTCCGGCTGTCAGGTGCTGCTCGCCGAGGATGGCTTCGACGCCCTGGCGAAGATCGCCGACCACAACCCCGACGTGATCT
TCGTCGACATCATGATGCCGCGGCTGGACGGCTACCAGACCTGCGCCCTGATCAAGAAAAACCCGCGGCTGGCCTCGACC
CCCGTGATCATGCTGTCATCGCGCGACGGGCTGTTCGATCGCGCGCGCGGCCGCATGGTGGGTTCGGACGAATACCTCAC
CAAGCCTTTCACCAAGGACAGCCTGCTGAAGGCCGTTGCCCAGCACTCCGGTCGCAGCAGCACCACCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(8-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A127K6Y0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

68.333

93.023

0.636

Multiple sequence alignment