Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | AC731_RS12285 | Genome accession | NZ_CP014646 |
| Coordinates | 2622617..2623876 (-) | Length | 419 a.a. |
| NCBI ID | WP_048706455.1 | Uniprot ID | A0A127K6R6 |
| Organism | Thauera humireducens strain SgZ-1 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2617617..2628876
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AC731_RS12265 (AC731_012265) | ahpF | 2618567..2620132 (-) | 1566 | WP_048706447.1 | alkyl hydroperoxide reductase subunit F | - |
| AC731_RS12270 (AC731_012270) | ahpC | 2620262..2620825 (-) | 564 | WP_048706452.1 | alkyl hydroperoxide reductase subunit C | - |
| AC731_RS12275 (AC731_012275) | ftsX | 2621032..2621928 (-) | 897 | WP_004264503.1 | permease-like cell division protein FtsX | - |
| AC731_RS12280 (AC731_012280) | - | 2621925..2622620 (-) | 696 | WP_004264505.1 | cell division ATP-binding protein FtsE | - |
| AC731_RS12285 (AC731_012285) | pilA | 2622617..2623876 (-) | 1260 | WP_048706455.1 | signal recognition particle-docking protein FtsY | Machinery gene |
| AC731_RS12290 (AC731_012290) | - | 2624039..2625421 (+) | 1383 | WP_048710072.1 | M16 family metallopeptidase | - |
| AC731_RS12295 (AC731_012295) | - | 2625453..2626817 (+) | 1365 | WP_048706459.1 | M16 family metallopeptidase | - |
| AC731_RS12300 (AC731_012300) | rsmD | 2626814..2627353 (+) | 540 | WP_004264121.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD | - |
| AC731_RS12305 (AC731_012305) | coaD | 2627350..2627841 (+) | 492 | WP_048706462.1 | pantetheine-phosphate adenylyltransferase | - |
| AC731_RS12310 (AC731_012310) | - | 2627858..2628109 (+) | 252 | WP_004264114.1 | YfhL family 4Fe-4S dicluster ferredoxin | - |
Sequence
Protein
Download Length: 419 a.a. Molecular weight: 43884.38 Da Isoelectric Point: 4.9019
>NTDB_id=172971 AC731_RS12285 WP_048706455.1 2622617..2623876(-) (pilA) [Thauera humireducens strain SgZ-1]
MFGFLKKKFGKNEQAESAPPSAEEIVQPQATDVVAPAVETPAAAESVAVVEQVAVDAVPPAGQVPQAEAPVEAIQPAVVP
DEPVAPVLVAAVVTPPAVAEAPVKRSWTDRLKAGLARTRQQLGGGLASLFGLRKIDEELLEELESTLLMADCGVEATQHL
IDDLRLRWKRDRLETADQLQQALADGLHGIIAPLEQPLDIAGHQPFIIMIAGVNGSGKTTSIGKLAKYFQAQGKSVLLAA
GDTFRAAAREQLMTWGERNNVTVVAQDGGDAAAVIFDAISAARARGIDVVLADTAGRLPTQLHLMEEIAKVRRVIAKADA
SGPHEVLLVLDANIGQNALAQVKAFDKAIGVTGLVVTKLDGTAKGGVLAAIARQCPKPLRFIGVGEGIDDLQPFKAREFV
DALFEPGAAAVKSGAGERA
MFGFLKKKFGKNEQAESAPPSAEEIVQPQATDVVAPAVETPAAAESVAVVEQVAVDAVPPAGQVPQAEAPVEAIQPAVVP
DEPVAPVLVAAVVTPPAVAEAPVKRSWTDRLKAGLARTRQQLGGGLASLFGLRKIDEELLEELESTLLMADCGVEATQHL
IDDLRLRWKRDRLETADQLQQALADGLHGIIAPLEQPLDIAGHQPFIIMIAGVNGSGKTTSIGKLAKYFQAQGKSVLLAA
GDTFRAAAREQLMTWGERNNVTVVAQDGGDAAAVIFDAISAARARGIDVVLADTAGRLPTQLHLMEEIAKVRRVIAKADA
SGPHEVLLVLDANIGQNALAQVKAFDKAIGVTGLVVTKLDGTAKGGVLAAIARQCPKPLRFIGVGEGIDDLQPFKAREFV
DALFEPGAAAVKSGAGERA
Nucleotide
Download Length: 1260 bp
>NTDB_id=172971 AC731_RS12285 WP_048706455.1 2622617..2623876(-) (pilA) [Thauera humireducens strain SgZ-1]
ATGTTTGGTTTCCTGAAGAAGAAGTTCGGCAAGAACGAGCAGGCCGAATCGGCCCCGCCATCGGCCGAAGAAATCGTCCA
GCCGCAGGCGACCGATGTCGTCGCGCCGGCTGTCGAGACGCCCGCCGCTGCCGAGTCCGTGGCGGTGGTCGAGCAGGTCG
CAGTCGATGCCGTTCCGCCTGCCGGGCAGGTGCCTCAGGCGGAAGCACCTGTCGAAGCGATCCAGCCGGCCGTCGTGCCG
GACGAGCCCGTTGCGCCGGTGCTGGTCGCCGCCGTGGTCACCCCTCCGGCGGTGGCCGAGGCGCCGGTGAAGCGCTCCTG
GACCGATCGTCTCAAGGCGGGCCTGGCACGCACCCGCCAGCAACTGGGGGGCGGCCTCGCCAGCCTGTTCGGCCTGCGCA
AGATCGACGAGGAACTGCTCGAGGAACTGGAGTCGACGCTGCTGATGGCCGACTGCGGCGTCGAGGCCACCCAGCACCTG
ATCGACGACCTGCGCCTGCGCTGGAAGCGCGACCGGCTCGAGACCGCCGACCAGTTGCAGCAGGCACTCGCCGACGGGCT
GCACGGCATCATCGCGCCGCTGGAACAGCCGCTGGACATCGCGGGCCACCAGCCCTTCATCATCATGATCGCGGGCGTCA
ACGGCTCGGGCAAGACGACCTCCATCGGCAAGCTCGCCAAGTATTTCCAGGCCCAGGGCAAGAGCGTGCTGCTGGCTGCG
GGCGACACCTTCCGCGCGGCGGCGCGCGAGCAGCTGATGACCTGGGGCGAGCGCAACAACGTCACCGTCGTGGCGCAGGA
CGGCGGTGATGCCGCGGCGGTGATCTTCGACGCGATCAGCGCTGCGCGCGCGCGCGGAATCGACGTCGTGCTCGCCGACA
CCGCCGGCCGTTTGCCGACCCAGCTTCATCTGATGGAAGAGATCGCCAAGGTCCGGCGGGTGATCGCCAAGGCCGATGCG
TCCGGCCCGCACGAGGTGCTGCTGGTGCTCGACGCCAACATCGGGCAGAACGCGCTGGCGCAGGTGAAGGCTTTCGACAA
GGCGATCGGGGTGACCGGCCTGGTGGTGACCAAGCTCGACGGCACCGCCAAGGGCGGCGTGCTGGCCGCGATCGCGCGCC
AGTGTCCCAAGCCGCTGCGCTTCATCGGCGTGGGCGAGGGCATCGACGACCTGCAGCCGTTCAAGGCGCGTGAATTCGTC
GATGCGCTGTTCGAGCCCGGTGCGGCGGCGGTGAAGAGCGGAGCGGGCGAACGCGCATGA
ATGTTTGGTTTCCTGAAGAAGAAGTTCGGCAAGAACGAGCAGGCCGAATCGGCCCCGCCATCGGCCGAAGAAATCGTCCA
GCCGCAGGCGACCGATGTCGTCGCGCCGGCTGTCGAGACGCCCGCCGCTGCCGAGTCCGTGGCGGTGGTCGAGCAGGTCG
CAGTCGATGCCGTTCCGCCTGCCGGGCAGGTGCCTCAGGCGGAAGCACCTGTCGAAGCGATCCAGCCGGCCGTCGTGCCG
GACGAGCCCGTTGCGCCGGTGCTGGTCGCCGCCGTGGTCACCCCTCCGGCGGTGGCCGAGGCGCCGGTGAAGCGCTCCTG
GACCGATCGTCTCAAGGCGGGCCTGGCACGCACCCGCCAGCAACTGGGGGGCGGCCTCGCCAGCCTGTTCGGCCTGCGCA
AGATCGACGAGGAACTGCTCGAGGAACTGGAGTCGACGCTGCTGATGGCCGACTGCGGCGTCGAGGCCACCCAGCACCTG
ATCGACGACCTGCGCCTGCGCTGGAAGCGCGACCGGCTCGAGACCGCCGACCAGTTGCAGCAGGCACTCGCCGACGGGCT
GCACGGCATCATCGCGCCGCTGGAACAGCCGCTGGACATCGCGGGCCACCAGCCCTTCATCATCATGATCGCGGGCGTCA
ACGGCTCGGGCAAGACGACCTCCATCGGCAAGCTCGCCAAGTATTTCCAGGCCCAGGGCAAGAGCGTGCTGCTGGCTGCG
GGCGACACCTTCCGCGCGGCGGCGCGCGAGCAGCTGATGACCTGGGGCGAGCGCAACAACGTCACCGTCGTGGCGCAGGA
CGGCGGTGATGCCGCGGCGGTGATCTTCGACGCGATCAGCGCTGCGCGCGCGCGCGGAATCGACGTCGTGCTCGCCGACA
CCGCCGGCCGTTTGCCGACCCAGCTTCATCTGATGGAAGAGATCGCCAAGGTCCGGCGGGTGATCGCCAAGGCCGATGCG
TCCGGCCCGCACGAGGTGCTGCTGGTGCTCGACGCCAACATCGGGCAGAACGCGCTGGCGCAGGTGAAGGCTTTCGACAA
GGCGATCGGGGTGACCGGCCTGGTGGTGACCAAGCTCGACGGCACCGCCAAGGGCGGCGTGCTGGCCGCGATCGCGCGCC
AGTGTCCCAAGCCGCTGCGCTTCATCGGCGTGGGCGAGGGCATCGACGACCTGCAGCCGTTCAAGGCGCGTGAATTCGTC
GATGCGCTGTTCGAGCCCGGTGCGGCGGCGGTGAAGAGCGGAGCGGGCGAACGCGCATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Neisseria gonorrhoeae MS11 |
54.245 |
100 |
0.549 |